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L3_072_000M1_scaffold_6782

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_6782_1
unknown

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comp(2..991)
DNA (990bp) protein (330aa)

This feature has no annotations

L3_072_000M1_scaffold_6782_2
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1068..1973)
DNA (906bp) protein (302aa)
Scaffoldin C n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VVM2_9FIRM
Scaffoldin C {ECO:0000313|EMBL:CCZ84542.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
large extracellular alpha-helical protein
L3_072_000M1_scaffold_6782_3
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2483..3715)
DNA (1233bp) protein (411aa)
Bacterial capsule synthesis protein PGA_cap n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LBB4_RUMC1
Bacterial capsule synthesis protein PGA_cap.
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:CBL16909.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_072_000M1_scaffold_6782_4
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3736..4209)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37A10
Predicted membrane protein {ECO:0000313|EMBL:CCZ83819.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
GtrA family protein
L3_072_000M1_scaffold_6782_5
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4619..5881
DNA (1263bp) protein (421aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MSY3_9FIRM
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CDF02933.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Hemolysins and related proteins containing CBS domains
L3_072_000M1_scaffold_6782_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6028..6951)
DNA (924bp) protein (308aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWC8_9FIRM
Transposase {ECO:0000313|EMBL:KEZ85425.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
transposase, IS605 OrfB family
Displaying 6 items

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