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L3_072_000M1_scaffold_4081

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4081_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(99..383)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R102_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91845.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_072_000M1_scaffold_4081_2
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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525..1184
DNA (660bp) protein (220aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MKV9_9FIRM
L3_072_000M1_scaffold_4081_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1198..2016
DNA (819bp) protein (273aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
punA; Purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THL4_9FIRM
L3_072_000M1_scaffold_4081_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2029..3288
DNA (1260bp) protein (420aa)
Cytosine deaminase and related metal-dependent hydrolases n=1 Tax=Clostridium sp. CAG:75 RepID=R5T6L1_9CLOT
Cytosine deaminase and related metal-dependent hydrolases {ECO:0000313|EMBL:CCZ54596.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
conserved hypothetical protein
L3_072_000M1_scaffold_4081_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3511..3885
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP putative n=1 Tax=Clostridium sp. CAG:352 RepID=R6QV79_9CLOT
Endoribonuclease L-PSP putative {ECO:0000313|EMBL:CDC36894.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
endoribonuclease L-PSP, putative
L3_072_000M1_scaffold_4081_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3893..5476
DNA (1584bp) protein (528aa)
cls; cardiolipin synthetase (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99756.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000M1_scaffold_4081_7
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5534..6091
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LC94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56399.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L3_072_000M1_scaffold_4081_8
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6206..6934
DNA (729bp) protein (243aa)
Serine/threonine protein phosphatase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MIW6_9FIRM
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CDF00565.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
protein serine/threonine phosphatase
L3_072_000M1_scaffold_4081_9
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7005..9266
DNA (2262bp) protein (754aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase {ECO:0000313|EMBL:CBL17024.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CBL17024.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Serine/threonine protein kinase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LBM9_RUMC1
L3_072_000M1_scaffold_4081_10
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9253..10140
DNA (888bp) protein (296aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MKT5_9FIRM
L3_072_000M1_scaffold_4081_11
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10179..10865
DNA (687bp) protein (229aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MHJ4_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CDF00569.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Displaying 11 items

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