ggKbase home page

L3_072_000M1_scaffold_4428

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4428_1
unknown

Not on your lists

3..386
DNA (384bp) protein (128aa)

This feature has no annotations

L3_072_000M1_scaffold_4428_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

591..1373
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LDZ8_9FIRM
Metal cation transporter, ZIP family {ECO:0000313|EMBL:ERJ87694.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted divalent heavy-metal cations transporter
L3_072_000M1_scaffold_4428_3
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1508..2623
DNA (1116bp) protein (372aa)
monofunctional chorismate mutase, gram positive-type, clade 2 (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MP54_9FIRM
Prephenate dehydratase {ECO:0000313|EMBL:CDF01532.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L3_072_000M1_scaffold_4428_4
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2698..3780)
DNA (1083bp) protein (361aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MPJ8_9FIRM
6-phosphofructokinase 1 {ECO:0000313|EMBL:CDF01858.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L3_072_000M1_scaffold_4428_5
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3980..6256)
DNA (2277bp) protein (759aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Ruminococcus sp. CAG:379 RepID=R6ZX05_9FIRM
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDD53033.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
signaling protein
L3_072_000M1_scaffold_4428_6
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6659..7345
DNA (687bp) protein (229aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MNB7_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDF01856.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_000M1_scaffold_4428_7
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7308..8783
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
histidine kinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C377AA
Signal transduction histidine kinase
L3_072_000M1_scaffold_4428_8
unknown

Not on your lists

9139..10143
DNA (1005bp) protein (335aa)

This feature has no annotations

L3_072_000M1_scaffold_4428_9
unknown

Not on your lists

10156..10236
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 9 items

View Taxonomy