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L3_072_000M1_scaffold_3152

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3152_1
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(537..1244)
DNA (708bp) protein (236aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U0G4_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDC77945.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L3_072_000M1_scaffold_3152_2
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(1334..2278)
DNA (945bp) protein (315aa)
Putative uncharacterized protein id=4069641 bin=GWF2_Clostridiales_36_10 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_3152_3
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2325..3662)
DNA (1338bp) protein (446aa)
Peptidase M23 n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ATL3_THEM3
lipoprotein NlpD/LppB
Lipoprotein NlpD/LppB {ECO:0000313|EMBL:AIS53521.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
L3_072_000M1_scaffold_3152_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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3934..4230
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U4V4_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
30S ribosomal protein S6
L3_072_000M1_scaffold_3152_5
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4249..4710
DNA (462bp) protein (154aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SGE0_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
single stranded DNA-binding protein (ssb)
L3_072_000M1_scaffold_3152_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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4737..5084
DNA (348bp) protein (116aa)
30S ribosomal protein S18 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC8_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsR; 30S ribosomal protein S18
L3_072_000M1_scaffold_3152_7
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5451..6386)
DNA (936bp) protein (312aa)
S1 RNA binding domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EV81_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CDE05397.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
RNA binding S1 domain-containing protein
L3_072_000M1_scaffold_3152_8
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6537..7505
DNA (969bp) protein (323aa)
Come-like protein metallo beta-lactamase superfamily hydrolase n=1 Tax=Clostridium sp. CAG:448 RepID=R6SGD2_9CLOT
Come-like protein metallo beta-lactamase superfamily hydrolase {ECO:0000313|EMBL:CDC60213.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
beta-lactamase domain-containing protein
L3_072_000M1_scaffold_3152_9
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7693..8790)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EIY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE02859.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
PfoR protein
L3_072_000M1_scaffold_3152_10
unknown

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comp(9021..9812)
DNA (792bp) protein (264aa)

This feature has no annotations

L3_072_000M1_scaffold_3152_11
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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10021..10638
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
LexA repressor n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TLB9_9FIRM
SOS-response transcriptional repressor, LexA
L3_072_000M1_scaffold_3152_12
unknown

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10659..11390
DNA (732bp) protein (244aa)

This feature has no annotations

L3_072_000M1_scaffold_3152_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11387..11932
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003750359
Transcriptional regulator {ECO:0000313|EMBL:KJK45607.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_000M1_scaffold_3152_14
Thermocrinis ruber, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

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11925..13226
DNA (1302bp) protein (434aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=932678 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Thermocrinis.;" source="Thermocrinis ruber DSM 12173.;"
Dihydroorotase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AMW9_9CLOT
dihydroorotase
Displaying 14 items

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