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L3_072_000M1_scaffold_1794

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1794_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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202..2367
DNA (2166bp) protein (722aa)
Sulfatase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTE8_9CLOT
Sulfatase {ECO:0000313|EMBL:EOR20282.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
sulfatase
L3_072_000M1_scaffold_1794_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2593..4383)
DNA (1791bp) protein (597aa)
Arginyl-tRNA synthetase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0P9_9FIRM
Arginyl-tRNA synthetase {ECO:0000313|EMBL:CDE81621.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
argS; arginyl-tRNA synthetase
L3_072_000M1_scaffold_1794_3
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4380..5522)
DNA (1143bp) protein (381aa)
alr; alanine racemase Alr (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Alanine racemase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y9W3_CLOSH
L3_072_000M1_scaffold_1794_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5698..6039)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28930.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Uncharacterized protein with conserved CXXC pairs
L3_072_000M1_scaffold_1794_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6100..7341)
DNA (1242bp) protein (414aa)
Thioredoxin reductase (EC:1.5.3.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KR79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67549.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L3_072_000M1_scaffold_1794_6
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7351..8769)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2TBA8_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH97469.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
FAD binding domain protein
L3_072_000M1_scaffold_1794_7
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9269..10159)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J488_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28999.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
transcriptional regulator
L3_072_000M1_scaffold_1794_8
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10561..10710
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=4 Tax=Ruminococcus RepID=E6UFR4_RUMA7
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_072_000M1_scaffold_1794_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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10723..11040
DNA (318bp) protein (106aa)
Protein translocase subunit SecE n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF28_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
preprotein translocase, SecE subunit, bacterial
L3_072_000M1_scaffold_1794_10
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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11053..11598
DNA (546bp) protein (182aa)
Transcription antitermination protein nusG id=4069574 bin=GWF2_Clostridiales_36_10 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
transcription antitermination protein nusG
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_1794_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11710..12135
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium sp. CAG:678 RepID=R5KL07_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
LSU ribosomal protein L11P
L3_072_000M1_scaffold_1794_12
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12154..12849
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FZS7_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
rplA; 50S ribosomal protein L1
L3_072_000M1_scaffold_1794_13
unknown

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12964..13920
DNA (957bp) protein (319aa)

This feature has no annotations

L3_072_000M1_scaffold_1794_14
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(13977..15188)
DNA (1212bp) protein (404aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Glycine C-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZA1_9FIRM
2-amino-3-ketobutyrate coenzyme A ligase
L3_072_000M1_scaffold_1794_15
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(15208..16260)
DNA (1053bp) protein (351aa)
L-threonine 3-dehydrogenase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H8H2_9FIRM
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:CDB29861.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L-threonine 3-dehydrogenase
L3_072_000M1_scaffold_1794_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16497..18266)
DNA (1770bp) protein (590aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ70_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CCZ78040.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
lipopolysaccharide biosynthesis glycosyltransferase
L3_072_000M1_scaffold_1794_17
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18324..19160)
DNA (837bp) protein (279aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P0D6_9FIRM
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CCZ03136.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
glycosyl transferase family protein
L3_072_000M1_scaffold_1794_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19157..19981)
DNA (825bp) protein (275aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YHA0_9FIRM
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CDA24104.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
phospholipid/glycerol acyltransferase
Displaying 18 items

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