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L3_072_000M1_scaffold_1819

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1819_1
unknown

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2..514
DNA (513bp) protein (171aa)

This feature has no annotations

L3_072_000M1_scaffold_1819_2
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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608..1186
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BQL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57788.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_072_000M1_scaffold_1819_3
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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1173..1901
DNA (729bp) protein (243aa)
UPI000311603C related cluster n=1 Tax=unknown RepID=UPI000311603C
Uncharacterized protein {ECO:0000313|EMBL:CDB44238.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_072_000M1_scaffold_1819_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1898..2629
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26584.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_072_000M1_scaffold_1819_5
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3340..5658)
DNA (2319bp) protein (773aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W7M0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD02764.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
ABC-type multidrug transport system, ATPase and permease components
L3_072_000M1_scaffold_1819_6
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5670..6188)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PXD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20888.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_072_000M1_scaffold_1819_7
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(6220..8562)
DNA (2343bp) protein (781aa)
ABC transporter related protein id=3445888 bin=GWF2_Clostridiales_36_10 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
ABC transporter permease/ATP-binding protein
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_1819_8
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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9006..9479
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XXY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD21196.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
L3_072_000M1_scaffold_1819_9
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9508..10419
DNA (912bp) protein (304aa)
Metallo-beta-lactamase domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SGV2_RUMAL
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EGC01489.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
metallo-beta-lactamase superfamily exported protein
L3_072_000M1_scaffold_1819_10
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10783..11889
DNA (1107bp) protein (369aa)
Prephenate dehydratase (EC:4.2.1.51)
Chorismate mutase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W4P9_9FIRM
Chorismate mutase {ECO:0000313|EMBL:CDD01704.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_1819_11
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11886..12920
DNA (1035bp) protein (345aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VX47_9FIRM
L3_072_000M1_scaffold_1819_12
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12917..14011
DNA (1095bp) protein (365aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DW23_9FIRM
L3_072_000M1_scaffold_1819_13
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14022..15272
DNA (1251bp) protein (417aa)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DKM0_9FIRM
Shikimate kinase {ECO:0000313|EMBL:CDA89048.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Shikimate 5-dehydrogenase
L3_072_000M1_scaffold_1819_14
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15274..16491
DNA (1218bp) protein (406aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|SAAS:SAAS00240533};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DXR2_9FIRM
L3_072_000M1_scaffold_1819_15
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16507..17412
DNA (906bp) protein (302aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Clostridium sp. CAG:448 RepID=R6SS70_9CLOT
Prephenate dehydrogenase {ECO:0000313|EMBL:CDC60384.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_072_000M1_scaffold_1819_16
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17461..18489
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium sp. CAG:448 RepID=R6SK92_9CLOT
L3_072_000M1_scaffold_1819_17
unknown

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19407..19829
DNA (423bp) protein (141aa)

This feature has no annotations

L3_072_000M1_scaffold_1819_18
unknown

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comp(20190..20306)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 18 items

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