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L3_072_000M1_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_324_1
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(153..1523)
DNA (1371bp) protein (457aa)
Uracil permease n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ET46_9FIRM
Uracil permease {ECO:0000313|EMBL:CDE05775.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
putative xanthine/uracil permease
L3_072_000M1_scaffold_324_2
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1601..2143)
DNA (543bp) protein (181aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB96_AMMDK
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
L3_072_000M1_scaffold_324_3
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3250..3672
DNA (423bp) protein (141aa)
Heat shock protein Hsp20 n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FR62_9FIRM
Heat shock protein Hsp20 {ECO:0000313|EMBL:CDE17774.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hsp20; Heat shock protein Hsp20
L3_072_000M1_scaffold_324_4
unknown

Not on your lists

3909..4112
DNA (204bp) protein (68aa)

This feature has no annotations

L3_072_000M1_scaffold_324_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4538..4777)
DNA (240bp) protein (80aa)
Arsenical-resistance protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BBE1_9FIRM
Arsenical-resistance protein {ECO:0000313|EMBL:EHO26682.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
arsB; putative arsenite resistance protein ArsB
L3_072_000M1_scaffold_324_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4774..5145)
DNA (372bp) protein (124aa)
Redox-active disulfide protein 2 n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD55_9FIRM
Redox-active disulfide protein 2 {ECO:0000313|EMBL:EET61289.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_072_000M1_scaffold_324_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5161..6174)
DNA (1014bp) protein (338aa)
Putative permease n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD56_9FIRM
Putative permease {ECO:0000313|EMBL:EET61290.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_072_000M1_scaffold_324_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7107..7772)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31798.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Nitroreductase family protein
L3_072_000M1_scaffold_324_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7717..8148)
DNA (432bp) protein (144aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9N0_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEG31795.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
transcriptional regulator, ArsR family
L3_072_000M1_scaffold_324_10
unknown

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comp(8602..9351)
DNA (750bp) protein (250aa)

This feature has no annotations

L3_072_000M1_scaffold_324_11
unknown

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comp(9389..10501)
DNA (1113bp) protein (371aa)

This feature has no annotations

L3_072_000M1_scaffold_324_12
unknown

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comp(10658..11194)
DNA (537bp) protein (179aa)

This feature has no annotations

L3_072_000M1_scaffold_324_13
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11654..11908
DNA (255bp) protein (85aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RY00_9CLOT
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AGY77656.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L3_072_000M1_scaffold_324_14
unknown

Not on your lists

11908..12768
DNA (861bp) protein (287aa)

This feature has no annotations

L3_072_000M1_scaffold_324_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

13584..14444
DNA (861bp) protein (287aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5U6_9FIRM
DegV family protein {ECO:0000313|EMBL:CCZ46204.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
degV family protein
L3_072_000M1_scaffold_324_16
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists


14761..17400
DNA (2640bp) protein (880aa)
valS; Valine-tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase id=3609442 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_072_000M1_scaffold_324_17
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17530..17865
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Clostridium sp. CAG:448 RepID=R6TVF6_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_072_000M1_scaffold_324_18
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17892..18323
DNA (432bp) protein (144aa)
anti-sigma regulatory factor, serine/threonine protein kinase (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N4B7_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CDC03139.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_072_000M1_scaffold_324_19
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18334..19050
DNA (717bp) protein (239aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PW16_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ20418.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
sigF; RNA polymerase sigma-F factor SigF
L3_072_000M1_scaffold_324_20
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19835..20569
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein BN766_00568 n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PX86_9FIRM
Probable transcriptional regulatory protein BN766_00568 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
putative transcriptional regulatory protein Ccel_0181
L3_072_000M1_scaffold_324_21
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21161..21769
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33157.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
L3_072_000M1_scaffold_324_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21953..22447)
DNA (495bp) protein (165aa)
Transcriptional repressor NrdR n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FV69_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
ATP-cone domain-containing protein
L3_072_000M1_scaffold_324_23
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(22757..23059)
DNA (303bp) protein (101aa)
UPF0473 protein Helmi_02360 n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U2V3_9FIRM
UPF0473 protein Helmi_02360 {ECO:0000313|EMBL:CDC74426.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_072_000M1_scaffold_324_24
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23334..24176
DNA (843bp) protein (281aa)
Pantothenate kinase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENS3_9FIRM
Pantothenate kinase {ECO:0000313|EMBL:CDE04101.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
pantothenate kinase
L3_072_000M1_scaffold_324_25
unknown

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24318..25355
DNA (1038bp) protein (346aa)

This feature has no annotations

L3_072_000M1_scaffold_324_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25646..27145
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41950.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_324_27
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27142..27807
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WBI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD04209.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_324_28
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27941..28780)
DNA (840bp) protein (280aa)
Putative lipoprotein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RP00_ACIFV
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADB46776.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L3_072_000M1_scaffold_324_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29295..30386)
DNA (1092bp) protein (364aa)
Heavy metal-associated domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1Q7_9CLOT
Heavy metal-associated domain protein {ECO:0000313|EMBL:EJF39133.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
heavy metal transport/detoxification protein
L3_072_000M1_scaffold_324_30
unknown

Not on your lists

31077..31208
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying items 1-30 of 107 in total

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