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L3_072_000M1_scaffold_727

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_727_1
Asaia platycodi, Asaia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..479
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PKC3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDG40808.1}; TaxID=1382230 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Asaia.;" source="Asaia platycodi SF2.1.;"
pg1 protein, homology to Homo sapiens
L3_072_000M1_scaffold_727_2
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

761..1435
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PWP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20618.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_072_000M1_scaffold_727_3
unknown

Not on your lists

1432..1845
DNA (414bp) protein (138aa)

This feature has no annotations

L3_072_000M1_scaffold_727_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(1842..2483)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TTU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC75565.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_072_000M1_scaffold_727_5
Phanerochaete carnosa, Phanerochaete, Polyporales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(2627..3058)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) RepID=K5XF83_PHACS
Uncharacterized protein {ECO:0000313|EMBL:EKM61747.1}; TaxID=650164 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Phanerochaetaceae; Phanerochaete.;" source="Phanerochaete carnosa (strain HHB-10118-sp) (White-rot fungus); (Peniophora carnosa).;"
hypothetical protein
L3_072_000M1_scaffold_727_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3092..4342)
DNA (1251bp) protein (417aa)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Histidine--tRNA ligase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CS77_9CLOT
histidyl-tRNA synthetase
L3_072_000M1_scaffold_727_7
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4362..5147)
DNA (786bp) protein (262aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05705.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_727_8
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5268..6608)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V8Q4_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK46514.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_072_000M1_scaffold_727_9
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6622..7170)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TT58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF12468.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L3_072_000M1_scaffold_727_10
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7190..8374)
DNA (1185bp) protein (395aa)
Exopolysaccharide biosynthesis protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SPX9_CLOC7
exopolysaccharide biosynthesis protein
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AIQ62237.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L3_072_000M1_scaffold_727_11
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8371..9408)
DNA (1038bp) protein (346aa)
Exopolysaccharide biosynthesis protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SPX9_CLOC7
exopolysaccharide biosynthesis protein
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ADL52115.1}; Flags: Precursor;; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_072_000M1_scaffold_727_12
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9922..11208
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ES58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05103.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_072_000M1_scaffold_727_13
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11201..11884
DNA (684bp) protein (228aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BU90_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:CDA67668.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
GTP pyrophosphokinase
L3_072_000M1_scaffold_727_14
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12096..13199)
DNA (1104bp) protein (368aa)
Transcriptional regulator, XRE family n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RDF3_ANAPD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV29216.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L3_072_000M1_scaffold_727_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

13990..17505
DNA (3516bp) protein (1172aa)
Putative uncharacterized protein id=3473861 bin=GWF2_Clostridiales_38_85 species=Eubacterium siraeum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L3_072_000M1_scaffold_727_16
unknown

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17553..18398
DNA (846bp) protein (282aa)

This feature has no annotations

L3_072_000M1_scaffold_727_17
unknown

Not on your lists

comp(18656..19030)
DNA (375bp) protein (125aa)

This feature has no annotations

L3_072_000M1_scaffold_727_18
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19042..20667)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9S7G4_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC04820.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_072_000M1_scaffold_727_19
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20773..21711)
DNA (939bp) protein (313aa)
ABC transporter permease protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQL3_OSCVS
ABC transporter permease protein
ABC transporter permease protein {ECO:0000313|EMBL:BAK97295.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_072_000M1_scaffold_727_20
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21712..22401)
DNA (690bp) protein (230aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC transporter n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B3C9A1
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EUC78652.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
L3_072_000M1_scaffold_727_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22414..23448)
DNA (1035bp) protein (345aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridiales RepID=A7B731_RUMGN
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDN76293.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_072_000M1_scaffold_727_22
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(23448..23927)
DNA (480bp) protein (160aa)
Transcriptional regulator Fur family n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BKL5_9FIRM
Transcriptional regulator Fur family {ECO:0000313|EMBL:CDD66082.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Fe2+/Zn2+ uptake regulation proteins
L3_072_000M1_scaffold_727_23
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24077..24691)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LBU1_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL17086.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_072_000M1_scaffold_727_24
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

25072..25260
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TYV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77370.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_072_000M1_scaffold_727_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25260..25634
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63843.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_072_000M1_scaffold_727_26
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25675..27885)
DNA (2211bp) protein (737aa)
X-X-X-Leu-X-X-Gly heptad repeat-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LYI9_CLOCD
X-X-X-Leu-X-X-Gly heptad repeat-containing protein
X-X-X-Leu-X-X-Gly heptad repeat-containing protein {ECO:0000313|EMBL:AEV69977.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_072_000M1_scaffold_727_27
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27878..29977)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05295.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_072_000M1_scaffold_727_28
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29983..30591)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVQ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE19364.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L3_072_000M1_scaffold_727_29
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30742..31299)
DNA (558bp) protein (186aa)
Regulatory protein TetR n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJ93_9CLOT
Regulatory protein TetR {ECO:0000313|EMBL:CDA63285.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
TetR family transcriptional regulator
L3_072_000M1_scaffold_727_30

Not on your lists

comp(31301..31525)
DNA (225bp) protein (75aa)
Transcriptional regulator (Fragment) n=1 Tax=gut metagenome RepID=J9CPR5_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:EJX02101.1}; Flags: Fragment;; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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