ggKbase home page

L3_072_011G1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 212 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_011G1_scaffold_11_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1161)
DNA (1161bp) protein (387aa)
Putative autotransporter/adhesin n=22 Tax=Escherichia coli RepID=Q0TI10_ECOL5
autotransporter/adhesin
Porin%2C autotransporter (AT) family {ECO:0000313|EMBL:CKI14079.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_011G1_scaffold_11_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1537..1863)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=B3HPA4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW99154.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_011G1_scaffold_11_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1871..2056)
DNA (186bp) protein (62aa)
Uncharacterized protein YnbE n=953 Tax=Enterobacteriaceae RepID=YNBE_ECOL6
ynbE; hypothetical protein
YnbE-like lipofamily protein {ECO:0000313|EMBL:KEJ77646.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
L3_072_011G1_scaffold_11_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2053..4692)
DNA (2640bp) protein (880aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T6PI85_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU11171.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
L3_072_011G1_scaffold_11_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4900..5889
DNA (990bp) protein (330aa)
D-lactate dehydrogenase (EC:1.1.1.28)
D-lactate dehydrogenase {ECO:0000313|EMBL:EFJ99379.1}; EC=1.1.1.28 {ECO:0000313|EMBL:EFJ99379.1};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
D-lactate dehydrogenase n=24 Tax=Escherichia coli RepID=Q0TI14_ECOL5
L3_072_011G1_scaffold_11_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6000..6422
DNA (423bp) protein (141aa)
Heat shock protein hslJ n=376 Tax=Escherichia RepID=E2QLV9_ECOLX
hslJ; heat-inducible protein
Heat shock protein hslJ {ECO:0000313|EMBL:KEJ59938.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_072_011G1_scaffold_11_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6419..6685)
DNA (267bp) protein (89aa)
Uncharacterized protein YdbJ n=905 Tax=Enterobacteriaceae RepID=YDBJ_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV99351.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_072_011G1_scaffold_11_8
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6959..10483
DNA (3525bp) protein (1175aa)
pyruvate-flavodoxin oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Pyruvate-flavodoxin oxidoreductase n=24 Tax=Escherichia coli RepID=Q0TI17_ECOL5
L3_072_011G1_scaffold_11_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..11982
DNA (1134bp) protein (378aa)
Outer membrane pore protein N, non-specific n=483 Tax=Escherichia RepID=A1AB10_ECOK1
outer membrane protein porin OmpN
Outer membrane protein N {ECO:0000313|EMBL:EOV99349.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_072_011G1_scaffold_11_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12123..12557
DNA (435bp) protein (145aa)
Universal stress protein F n=958 Tax=Enterobacteriaceae RepID=USPF_ECO57
ynaF; hypothetical protein
Universal stress family protein {ECO:0000313|EMBL:ESA83653.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_072_011G1_scaffold_11_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12745..13014
DNA (270bp) protein (90aa)
Uncharacterized protein n=183 Tax=Escherichia coli RepID=B7MUI9_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR07755.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_072_011G1_scaffold_11_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14883..15818
DNA (936bp) protein (312aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=236 Tax=Escherichia RepID=TTCA_ECO81
C32 tRNA thiolase
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000255|HAMAP-Rule:MF_01850}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_072_011G1_scaffold_11_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15947..17320)
DNA (1374bp) protein (458aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
ATP-dependent RNA helicase DbpA n=19 Tax=Escherichia coli RepID=B3HP92_ECOLX
ATP-dependent RNA helicase DbpA
L3_072_011G1_scaffold_11_14
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17350..17523)
DNA (174bp) protein (58aa)
Uncharacterized protein n=609 Tax=Escherichia RepID=J7R0K2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELC19104.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
L3_072_011G1_scaffold_11_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17798..18781)
DNA (984bp) protein (328aa)
Zinc transport protein ZntB n=35 Tax=Escherichia coli RepID=ZNTB_ECOL5
zntB; zinc transporter
Zinc transport protein ZntB {ECO:0000255|HAMAP-Rule:MF_01565}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
L3_072_011G1_scaffold_11_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19036..20268
DNA (1233bp) protein (411aa)
Uncharacterized protein YdaM n=289 Tax=Enterobacteriaceae RepID=YDAM_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA25817.1}; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7 str. SS52.;"
L3_072_011G1_scaffold_11_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20289..20852)
DNA (564bp) protein (188aa)
Smr domain protein n=25 Tax=Escherichia coli RepID=B3HP89_ECOLX
hypothetical protein
Smr domain protein {ECO:0000313|EMBL:EIH76998.1}; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
L3_072_011G1_scaffold_11_18
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21047..22558)
DNA (1512bp) protein (504aa)
Multidrug resistance protein B n=30 Tax=Escherichia coli RepID=Q0TI28_ECOL5
multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:CDC77303.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_072_011G1_scaffold_11_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22558..23586)
DNA (1029bp) protein (343aa)
Multidrug resistance protein A n=2 Tax=Escherichia coli RepID=T6PI69_ECOLX
multidrug resistance protein A
Multidrug resistance protein A {ECO:0000313|EMBL:EQP56660.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_011G1_scaffold_11_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23683..24498
DNA (816bp) protein (272aa)
Uncharacterized protein n=207 Tax=Escherichia coli RepID=G7R4L8_ECOC2
hypothetical protein
AraC family transcriptional regulator {ECO:0000313|EMBL:ELJ74499.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_011G1_scaffold_11_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25011..25526
DNA (516bp) protein (172aa)
O-6-alkylguanine-DNA:cysteine-protein methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Methylated-DNA--protein-cysteine methyltransferase n=28 Tax=Escherichia coli RepID=Q0TI31_ECOL5
L3_072_011G1_scaffold_11_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25721..26473
DNA (753bp) protein (251aa)
CRP/FNR family transcriptional regulator n=1 Tax=Escherichia coli B088 RepID=D6HWA1_ECOLX
fumarate and nitrate reduction regulatory protein
Electron transport regulator A {ECO:0000313|EMBL:EHU41916.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L3_072_011G1_scaffold_11_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26625..27575
DNA (951bp) protein (317aa)
Universal stress protein E n=1135 Tax=Enterobacteriaceae RepID=USPE_ECO57
universal stress protein E UspE
Universal stress protein E {ECO:0000313|EMBL:KDZ38865.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_072_011G1_scaffold_11_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27625..27882)
DNA (258bp) protein (86aa)
Uncharacterized protein YnaJ n=1383 Tax=Enterobacteriaceae RepID=YNAJ_ECO57
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EQN28593.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_072_011G1_scaffold_11_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28126..29157
DNA (1032bp) protein (344aa)
MscS family inner membrane protein ynaI n=59 Tax=Escherichia coli RepID=E2QLU0_ECOLX
hypothetical protein
MscS family inner membrane protein ynaI {ECO:0000313|EMBL:EQP56654.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_011G1_scaffold_11_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29208..30821)
DNA (1614bp) protein (538aa)
ABC transporter, substrate-binding protein, family 5 n=29 Tax=Escherichia coli RepID=D8BAX3_ECOLX
Periplasmic murein peptide-binding protein {ECO:0000313|EMBL:EOU93148.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
mppA; periplasmic murein peptide-binding protein
L3_072_011G1_scaffold_11_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31158..32057)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=158 Tax=Escherichia RepID=D5D1Y3_ECOKI
LysR family transcriptional regulator
Hypothetical transcriptional regulator YcjZ {ECO:0000313|EMBL:ABE07078.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_072_011G1_scaffold_11_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32195..33115
DNA (921bp) protein (307aa)
X-Pro dipeptidyl-peptidase (S15 family) n=29 Tax=Escherichia coli RepID=D8BAX1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDW82015.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_072_011G1_scaffold_11_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33186..33824
DNA (639bp) protein (213aa)
NAD(P)H:quinone oxidoreductase n=232 Tax=Escherichia coli RepID=E0IUT1_ECOLW
ymjC; putative NAD(P) binding enzyme
Uncharacterized protein {ECO:0000313|EMBL:EGP25362.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L3_072_011G1_scaffold_11_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34115..34843
DNA (729bp) protein (243aa)
Uncharacterized protein n=29 Tax=Escherichia coli RepID=B3HP75_ECOLX
murein peptide amidase A
Murein peptide amidase A {ECO:0000313|EMBL:AIX63190.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 212 in total

View Taxonomy