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L3_072_057G1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_24_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..399
DNA (399bp) protein (133aa)
Retron-type reverse transcriptase n=2 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJY0_9CLOT
retron-type reverse transcriptase
Retron-type reverse transcriptase {ECO:0000313|EMBL:AGF58859.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_057G1_scaffold_24_2
unknown

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457..564
DNA (108bp) protein (36aa)
Retron-type reverse transcriptase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTN4_9CLOT
L3_072_057G1_scaffold_24_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1225..2526
DNA (1302bp) protein (434aa)
Putative Tetratricopeptide repeat protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1E9_9CLOT
Putative Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDG02401.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
helix-turn-helix family protein
L3_072_057G1_scaffold_24_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2546..3808
DNA (1263bp) protein (421aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQ11_CLOBO
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EES49261.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
tetratricopeptide repeat protein
L3_072_057G1_scaffold_24_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3924..5972)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99102.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
transcriptional regulatory protein
L3_072_057G1_scaffold_24_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6119..8722
DNA (2604bp) protein (868aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Clostridium botulinum RepID=UPI0002E1E6D4
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
clpB2; chaperone protein ClpB
L3_072_057G1_scaffold_24_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8902..9294
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ES74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02040.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_072_057G1_scaffold_24_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9463..9657)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BYW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20171.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_072_057G1_scaffold_24_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10004..10600)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LR53_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83249.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_057G1_scaffold_24_10
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10867..11244
DNA (378bp) protein (126aa)
Putative Transcriptional regulator, GntR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBF1_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:KEZ88148.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
transcriptional regulator, GntR family
L3_072_057G1_scaffold_24_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11257..12405
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27575.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_072_057G1_scaffold_24_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12479..13366
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JSR2_HALH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72574.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_072_057G1_scaffold_24_13
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13369..13923
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01219.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NUDIX domain protein
L3_072_057G1_scaffold_24_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14023..14520
DNA (498bp) protein (166aa)
Flavodoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUY6_9CLOT
Flavodoxin {ECO:0000313|EMBL:EOR20525.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
flavodoxin
L3_072_057G1_scaffold_24_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14539..15189
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TL60_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AIY80416.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_072_057G1_scaffold_24_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15422..16876
DNA (1455bp) protein (485aa)
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN23_CLOBU
Threonine synthase {ECO:0000313|EMBL:KHD16095.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_072_057G1_scaffold_24_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16888..17784
DNA (897bp) protein (299aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
homoserine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002F55EFA
homoserine kinase
L3_072_057G1_scaffold_24_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17784..18221
DNA (438bp) protein (146aa)
UPF0735 ACT domain-containing protein CLL_A2896 n=2 Tax=Clostridium botulinum B RepID=Y2896_CLOBB
hypothetical protein
UPF0735 ACT domain-containing protein CLL_A2896 {ECO:0000255|HAMAP-Rule:MF_00707}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_057G1_scaffold_24_19
unknown

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comp(18298..18468)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_072_057G1_scaffold_24_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18633..19781
DNA (1149bp) protein (383aa)
Aminotransferase, class V n=2 Tax=Clostridium RepID=A6LT12_CLOB8
aminotransferase, class V
Aminotransferase, class V {ECO:0000313|EMBL:ABR33492.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_057G1_scaffold_24_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19778..20935
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CD32_9CLOT
L3_072_057G1_scaffold_24_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21031..21534
DNA (504bp) protein (168aa)
Putative Diamine acetyltransferase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1D6_9CLOT
Putative Diamine acetyltransferase 1 {ECO:0000313|EMBL:CDG02386.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
acetyltransferase domain protein
L3_072_057G1_scaffold_24_23
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21706..22848
DNA (1143bp) protein (381aa)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MUW4_9CLOT
hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_057G1_scaffold_24_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22845..23468
DNA (624bp) protein (208aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TN74_9CLOT
L3_072_057G1_scaffold_24_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23502..24788
DNA (1287bp) protein (429aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Histidinol dehydrogenase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MBK7_9CLOT
L3_072_057G1_scaffold_24_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24790..25845
DNA (1056bp) protein (352aa)
hisC2; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9)
Histidinol-phosphate aminotransferase HisC {ECO:0000313|EMBL:AGX44099.1}; EC=2.6.1.9 {ECO:0000313|EMBL:AGX44099.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Histidinol-phosphate aminotransferase HisC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTI4_CLOSA
L3_072_057G1_scaffold_24_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25838..26428
DNA (591bp) protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hisB; imidazoleglycerol-phosphate dehydratase HisB (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=4 Tax=Clostridium butyricum RepID=B1QTN8_CLOBU
L3_072_057G1_scaffold_24_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26437..27045
DNA (609bp) protein (203aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hisH1; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9C2_9CLOT
L3_072_057G1_scaffold_24_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27045..27764
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TN79_9CLOT
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
L3_072_057G1_scaffold_24_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27768..28529
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZG8_9CLOT
imidazole glycerol phosphate synthase subunit HisF
Displaying items 1-30 of 117 in total

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