ggKbase home page

L3_072_057G1_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_98_1
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..437
DNA (435bp) protein (145aa)
TRAP transporter, DctM subunit n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDV4_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EDR98124.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
TRAP transporter, DctM subunit
L3_072_057G1_scaffold_98_2
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

451..1458
DNA (1008bp) protein (336aa)
TRAP transporter solute receptor, DctP family n=3 Tax=Anaerostipes RepID=B0MDV3_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EDR98123.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L3_072_057G1_scaffold_98_3
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1707..2579
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=2 Tax=Anaerostipes RepID=E5VU59_9FIRM
L3_072_057G1_scaffold_98_4
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2612..3478)
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=3 Tax=Anaerostipes RepID=B0MDV1_9FIRM
AraC family bacterial regulatory protein {ECO:0000313|EMBL:CDC36284.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
AraC family bacterial regulatory protein
L3_072_057G1_scaffold_98_5
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3722..4948
DNA (1227bp) protein (409aa)
Transporter, major facilitator family protein n=2 Tax=Anaerostipes RepID=B0MDV0_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDR98120.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
inner membrane transport protein YdiN
L3_072_057G1_scaffold_98_6
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4994..6583
DNA (1590bp) protein (530aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Acetate CoA-transferase YdiF n=2 Tax=Anaerostipes RepID=E5VU56_9FIRM
acyl CoA:acetate/3-ketoacid CoA transferase
L3_072_057G1_scaffold_98_7
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6635..7087
DNA (453bp) protein (151aa)
MaoC-like protein n=3 Tax=Anaerostipes RepID=B0MDU8_9FIRM
MaoC-like protein {ECO:0000313|EMBL:CDC36561.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
MaoC like domain-containing protein
L3_072_057G1_scaffold_98_8
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7116..8069
DNA (954bp) protein (318aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=3 Tax=Anaerostipes RepID=B0MDU7_9FIRM
L3_072_057G1_scaffold_98_9
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8079..8453
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MDU6_9FIRM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDC36565.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
glyoxalase/bleomycin resistance protein/dioxygenase
L3_072_057G1_scaffold_98_10
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8469..8918
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
aroQ; 3-dehydroquinate dehydratase AroQ (EC:4.2.1.10)
3-dehydroquinate dehydratase n=3 Tax=Anaerostipes RepID=B0MDU5_9FIRM
L3_072_057G1_scaffold_98_11
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9072..10064
DNA (993bp) protein (331aa)
Periplasmic binding protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QUC0_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:CDC36569.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Fe3+-hydroxamate ABC transporter periplasmic protein
L3_072_057G1_scaffold_98_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10154..11695)
DNA (1542bp) protein (514aa)
Sulfite reductase, beta subunit (hemoprotein) (EC:1.7.7.1)
Nitrite/sulfite reductase ferredoxin domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDU3_9FIRM
Nitrite/sulfite reductase ferredoxin domain protein {ECO:0000313|EMBL:EDR98113.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_072_057G1_scaffold_98_13
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11839..12333
DNA (495bp) protein (165aa)
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EDR98112.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDR98112.1};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
HAD phosphatase, family IIIA n=3 Tax=Anaerostipes RepID=B0MDU2_9FIRM
hypothetical protein
L3_072_057G1_scaffold_98_14
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12346..12834
DNA (489bp) protein (163aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MDU1_9FIRM
Membrane flanked domain-containing protein {ECO:0000313|EMBL:CDC36576.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
bacterial PH domain protein
L3_072_057G1_scaffold_98_15
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12824..14335
DNA (1512bp) protein (504aa)
Membrane flanked domain-containing protein n=2 Tax=Anaerostipes RepID=E5VU47_9FIRM
Membrane flanked domain-containing protein {ECO:0000313|EMBL:CDC36577.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
bacterial PH domain protein
L3_072_057G1_scaffold_98_16
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14446..16437)
DNA (1992bp) protein (664aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Anaerostipes RepID=B0MDT8_9FIRM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:CDC36579.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_072_057G1_scaffold_98_17
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16618..17502
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDT7_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDR98107.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
transcriptional regulator, LysR family
L3_072_057G1_scaffold_98_18
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17600..18376
DNA (777bp) protein (259aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=3 Tax=Anaerostipes RepID=B0MDT6_9FIRM
L3_072_057G1_scaffold_98_19
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18393..19577
DNA (1185bp) protein (395aa)
Iron-containing alcohol dehydrogenase n=2 Tax=Anaerostipes RepID=E5VU43_9FIRM
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDC36582.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_072_057G1_scaffold_98_20
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19643..20200
DNA (558bp) protein (186aa)
Elongation factor P n=3 Tax=Anaerostipes RepID=B0MDT4_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
translation elongation factor P (EF-P)
L3_072_057G1_scaffold_98_21
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20203..21075
DNA (873bp) protein (291aa)
Integral membrane protein DUF6 n=3 Tax=Anaerostipes RepID=E5VU41_9FIRM
Integral membrane protein DUF6 {ECO:0000313|EMBL:CDC36584.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_072_057G1_scaffold_98_22
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21192..22124
DNA (933bp) protein (311aa)
Stage III sporulation protein AA n=4 Tax=Anaerostipes RepID=B0MDT2_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:CDC36585.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
stage III sporulation protein AA
L3_072_057G1_scaffold_98_23
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22117..22635
DNA (519bp) protein (173aa)
Stage III sporulation protein AB n=3 Tax=Anaerostipes RepID=E5VU38_9FIRM
Stage III sporulation protein AB {ECO:0000313|EMBL:CDC36586.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L3_072_057G1_scaffold_98_24
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22646..22843
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=3 Tax=Anaerostipes RepID=B0MDT0_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:CDC36587.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
stage III sporulation protein AC
L3_072_057G1_scaffold_98_25
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22855..23235
DNA (381bp) protein (127aa)
Stage III sporulation protein AD n=2 Tax=Anaerostipes RepID=E5VU36_9FIRM
Stage III sporulation protein AD {ECO:0000313|EMBL:CDC36588.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Stage III sporulation protein AC/AD protein family.
L3_072_057G1_scaffold_98_26
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23232..24356
DNA (1125bp) protein (375aa)
Putative stage III sporulation protein AE n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QUD5_9FIRM
Putative stage III sporulation protein AE {ECO:0000313|EMBL:CDC36589.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Stage III sporulation protein AE (spore_III_AE).
L3_072_057G1_scaffold_98_27
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24363..24818
DNA (456bp) protein (152aa)
Stage III sporulation protein AF (Spore_III_AF) n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDS7_9FIRM
Stage III sporulation protein AF (Spore_III_AF) {ECO:0000313|EMBL:EDR98097.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
Stage III sporulation protein AF (Spore_III_AF).
L3_072_057G1_scaffold_98_28
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24826..25368
DNA (543bp) protein (181aa)
Stage III sporulation protein AG n=3 Tax=Anaerostipes RepID=E5VU33_9FIRM
Putative stage III sporulation protein AG {ECO:0000313|EMBL:CDC36592.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L3_072_057G1_scaffold_98_29
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25372..25941
DNA (570bp) protein (190aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MDS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36594.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L3_072_057G1_scaffold_98_30
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26094..26471
DNA (378bp) protein (126aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MDS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36596.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy