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L3_072_057G1_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_109_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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217..987
DNA (771bp) protein (257aa)
Putative cell wall endopeptidase, family M23/M37 n=2 Tax=Clostridium botulinum B RepID=B2TK66_CLOBB
cell wall endopeptidase, family M23/M37
Peptidase M23 family protein {ECO:0000313|EMBL:AIY80951.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_072_057G1_scaffold_109_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1014..1871
DNA (858bp) protein (286aa)
Peptidase M50 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM13_CLOSA
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AGX41635.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_057G1_scaffold_109_3
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2040..2414
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AW61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27301.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
GntR family transcriptional regulator
L3_072_057G1_scaffold_109_4
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2419..3294
DNA (876bp) protein (292aa)
ABC transporter related protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHB3_CELLD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADZ83011.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_072_057G1_scaffold_109_5
unknown

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3300..4022
DNA (723bp) protein (241aa)

This feature has no annotations

L3_072_057G1_scaffold_109_6
unknown

Not on your lists

4081..4908
DNA (828bp) protein (276aa)

This feature has no annotations

L3_072_057G1_scaffold_109_7
unknown

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4856..5464
DNA (609bp) protein (203aa)

This feature has no annotations

L3_072_057G1_scaffold_109_8
unknown

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5448..6866
DNA (1419bp) protein (473aa)

This feature has no annotations

L3_072_057G1_scaffold_109_9
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6937..7860
DNA (924bp) protein (308aa)
Aldo/keto reductase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I0V4_CLOCE
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACL77510.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L3_072_057G1_scaffold_109_10
unknown

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8046..8525
DNA (480bp) protein (160aa)

This feature has no annotations

L3_072_057G1_scaffold_109_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8911..10776
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y0D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01287.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
radical SAM superfamily protein
L3_072_057G1_scaffold_109_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10745..11455
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R1A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96905.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_072_057G1_scaffold_109_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11470..12906
DNA (1437bp) protein (479aa)
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2H2_9CLOT
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EKQ55111.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ribonuclease, Rne/Rng family domain protein
L3_072_057G1_scaffold_109_14
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13106..14533
DNA (1428bp) protein (476aa)
Chitinase n=1 Tax=Serratia marcescens EGD-HP20 RepID=U1UVU2_SERMA
Chitinase {ECO:0000313|EMBL:KFF76982.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
glycoside hydrolase family protein
L3_072_057G1_scaffold_109_15
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14584..16419)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030E6905
Chitinase {ECO:0000313|EMBL:ETD67194.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
chitinase
L3_072_057G1_scaffold_109_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16670..18475
DNA (1806bp) protein (602aa)
chitinase D (EC:3.2.1.14)
Chitinase {ECO:0000313|EMBL:CDH90294.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CDH90294.1};; Chitinase A {ECO:0000313|EMBL:ACD23618.1}; EC=3.2.1.14 {ECO:0000313|EMBL:ACD23618.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Chitinase A n=2 Tax=Clostridium botulinum B RepID=B2TJG0_CLOBB
L3_072_057G1_scaffold_109_17
unknown

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18750..18839
DNA (90bp) protein (30aa)

This feature has no annotations

L3_072_057G1_scaffold_109_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19241..19549
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium colicanis 209318 RepID=N9XZF6_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplU; 50S ribosomal protein L21
L3_072_057G1_scaffold_109_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19555..19926
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0A6_CLOBA
hypothetical protein
Ribosomal protein {ECO:0000313|EMBL:KIL08822.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_057G1_scaffold_109_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19930..20229
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=RL27_CLOB8
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_072_057G1_scaffold_109_21
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20401..21687
DNA (1287bp) protein (429aa)
GTPase Obg n=1 Tax=Clostridium colicanis 209318 RepID=N9WE18_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cgtA; Obg family GTPase CgtA
L3_072_057G1_scaffold_109_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21704..22009
DNA (306bp) protein (102aa)
Putative CRS1/YhbY domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN08_9CLOT
Putative CRS1/YhbY domain protein {ECO:0000313|EMBL:CDG02577.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
CRS1 / YhbY domain protein
L3_072_057G1_scaffold_109_23

Not on your lists

22011..22613
DNA (603bp) protein (201aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGC0_CLOBU
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:ETJ16738.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_072_057G1_scaffold_109_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22615..23184
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K319_CLOBU
HD domain protein
Phosphohydrolase {ECO:0000313|EMBL:KJU73234.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_072_057G1_scaffold_109_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23197..24606
DNA (1410bp) protein (470aa)
Membrane-bound protein LytR n=2 Tax=Clostridium botulinum B RepID=B2TKI5_CLOBB
membrane-bound protein LytR
Membrane-bound protein LytR {ECO:0000313|EMBL:ACD24945.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_057G1_scaffold_109_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24608..25510
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Pseudouridine synthase, RluA family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2M4_9CLOT
L3_072_057G1_scaffold_109_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25490..26824)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WEL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71662.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
D-alanyl-D-alanine carboxypeptidase family protein
L3_072_057G1_scaffold_109_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26973..27572
DNA (600bp) protein (200aa)
DNA-binding protein, ComEA family n=2 Tax=Clostridium botulinum B RepID=B2TKI9_CLOBB
Competence ComEA helix-hairpin-helix repeat region domain protein {ECO:0000313|EMBL:AIY81638.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
competence ComEA helix-hairpin-helix repeat region domain protein
L3_072_057G1_scaffold_109_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27655..28374
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLH7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41664.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_057G1_scaffold_109_30
unknown

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28432..28728
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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