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L3_072_057G1_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_141_1
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1227
DNA (1227bp) protein (409aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=3 Tax=Anaerostipes RepID=B0MHE6_9FIRM
L3_072_057G1_scaffold_141_2
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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1412..1825
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=3 Tax=Anaerostipes RepID=B0MHE7_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
SSU ribosomal protein S12P
L3_072_057G1_scaffold_141_3
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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2080..2550
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=3 Tax=Anaerostipes RepID=B0MHE8_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
30S ribosomal protein S7
L3_072_057G1_scaffold_141_4
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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2604..4721
DNA (2118bp) protein (706aa)
Elongation factor G n=2 Tax=Anaerostipes RepID=R6QYQ6_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
elongation factor G
L3_072_057G1_scaffold_141_5
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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4875..6068
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=3 Tax=Anaerostipes RepID=B0MHF0_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_072_057G1_scaffold_141_6
unknown

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comp(5993..6199)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_072_057G1_scaffold_141_7
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6525..6821)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CL08_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49496.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L3_072_057G1_scaffold_141_8
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6843..7016)
DNA (174bp) protein (58aa)
Replication initiation factor family protein n=1 Tax=Clostridium difficile P50 RepID=T4RAM0_CLODI
Putative phage replication protein RstA
Uncharacterized protein {ECO:0000313|EMBL:EGX68514.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_072_057G1_scaffold_141_9
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7730..8260
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BC18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25459.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Predicted transcriptional regulator
L3_072_057G1_scaffold_141_10
unknown

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8276..8389
DNA (114bp) protein (38aa)

This feature has no annotations

L3_072_057G1_scaffold_141_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8547..12419
DNA (3873bp) protein (1291aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B814_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29662.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_072_057G1_scaffold_141_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12483..15191
DNA (2709bp) protein (903aa)
Repeat protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LNP6_9CLOT
Repeat, TIGR02543 family domain protein {ECO:0000313|EMBL:EQJ53486.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_072_057G1_scaffold_141_13
unknown

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15845..16024
DNA (180bp) protein (60aa)

This feature has no annotations

L3_072_057G1_scaffold_141_14
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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16088..18055
DNA (1968bp) protein (656aa)
PRD domain-containing protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YZQ7_9FIRM
PRD domain-containing protein {ECO:0000313|EMBL:CDA32908.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Transcriptional antiterminator
L3_072_057G1_scaffold_141_15
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18071..18517
DNA (447bp) protein (149aa)
PTS system, fructose subfamily, IIA component (EC:2.7.1.69)
PTS system, fructose subfamily, IIA component n=3 Tax=Clostridiales RepID=D4MU05_9FIRM
PTS system protein {ECO:0000313|EMBL:EFV16917.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_072_057G1_scaffold_141_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18774..19085
DNA (312bp) protein (104aa)
PTS system, fructose-specific, IIB component (EC:2.7.1.69)
PTS system, fructose-specific, IIB component n=4 Tax=Clostridiales RepID=D4MU06_9FIRM
PTS system protein {ECO:0000313|EMBL:EFV16916.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_072_057G1_scaffold_141_17
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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19104..20192
DNA (1089bp) protein (363aa)
Phosphotransferase system, EIIC n=3 Tax=Clostridiales RepID=B0NY63_9CLOT
PTS system protein {ECO:0000313|EMBL:CDA32905.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS system, fructose subfamily, IIC component
L3_072_057G1_scaffold_141_18
unknown

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20221..21075
DNA (855bp) protein (285aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBL38874.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL38874.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Fructose-bisphosphate aldolase n=3 Tax=Clostridiales RepID=D4MU08_9FIRM
L3_072_057G1_scaffold_141_19
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21098..21967
DNA (870bp) protein (290aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=4 Tax=Clostridiales RepID=D4MU09_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EDS22790.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_072_057G1_scaffold_141_20

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21977..22870
DNA (894bp) protein (298aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=U3KUU7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFK82694.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_072_057G1_scaffold_141_21
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23311..23517
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR96304.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_072_057G1_scaffold_141_22
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23514..23897
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR96304.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_072_057G1_scaffold_141_23
unknown

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23908..24108
DNA (201bp) protein (67aa)

This feature has no annotations

L3_072_057G1_scaffold_141_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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24174..25397
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XP44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97411.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transposase IS4 family protein
L3_072_057G1_scaffold_141_25
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25926..26378
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR96291.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L3_072_057G1_scaffold_141_26
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26375..26845
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR96292.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L3_072_057G1_scaffold_141_27
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27094..27819)
DNA (726bp) protein (242aa)
UTRA domain-containing protein n=2 Tax=Anaerostipes RepID=E5VVF1_9FIRM
UTRA domain-containing protein {ECO:0000313|EMBL:CDC38073.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
GntR family transcriptional regulator
L3_072_057G1_scaffold_141_28
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27830..28540)
DNA (711bp) protein (237aa)
UbiC transcription regulator-associated domain protein n=3 Tax=Anaerostipes RepID=B0MHF5_9FIRM
UTRA domain-containing protein {ECO:0000313|EMBL:CDC38070.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Transcriptional regulators
L3_072_057G1_scaffold_141_29
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28918..29937
DNA (1020bp) protein (340aa)
SIS domain protein n=3 Tax=Anaerostipes RepID=B0MHF7_9FIRM
SIS domain-containing protein {ECO:0000313|EMBL:CDC38067.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
SIS domain protein
L3_072_057G1_scaffold_141_30
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29982..31055
DNA (1074bp) protein (358aa)
SIS domain-containing protein n=2 Tax=Anaerostipes RepID=E5VVE8_9FIRM
SIS domain-containing protein {ECO:0000313|EMBL:CDC38063.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
sugar isomerase (SIS)
Displaying items 1-30 of 40 in total

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