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L3_072_057G1_scaffold_152

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_152_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1076)
DNA (1074bp) protein (358aa)
Ribosomal protein S1 family n=3 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1
rpsA; 30S ribosomal protein S1
Ribosomal protein S1 family {ECO:0000313|EMBL:EDT25274.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_072_057G1_scaffold_152_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1219..1422)
DNA (204bp) protein (68aa)
Heavy metal binding protein n=9 Tax=Clostridium perfringens RepID=Q0TNG1_CLOP1
heavy metal binding protein
Heavy metal binding protein {ECO:0000313|EMBL:EDT15561.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_057G1_scaffold_152_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1527..2291)
DNA (765bp) protein (255aa)
UPF0246 protein AC3_2739 n=3 Tax=Clostridium perfringens RepID=B1BRX3_CLOPF
UPF0246 protein CJD_2742 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_072_057G1_scaffold_152_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2457..2867)
DNA (411bp) protein (137aa)
CBS domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CYH7_CLOPF
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA16355.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_152_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2950..3855)
DNA (906bp) protein (302aa)
Exonuclease family protein n=10 Tax=Clostridium perfringens RepID=H7CYH8_CLOPF
exonuclease
Exonuclease family protein {ECO:0000313|EMBL:EDT15540.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_057G1_scaffold_152_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4110..5921)
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81861.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_152_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6037..7824)
DNA (1788bp) protein (596aa)
MutS-related protein n=2 Tax=Clostridium perfringens RepID=Q8XIG4_CLOPE
MutS-related protein {ECO:0000313|EMBL:BAB81862.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
MutS domain-containing protein
L3_072_057G1_scaffold_152_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8128..9657)
DNA (1530bp) protein (510aa)
PTS system, glucose-specific IIBC component {ECO:0000313|EMBL:EDT27685.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT27685.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ptsG; PTS system, glucose-specific IIBC component (EC:2.7.1.69)
PTS system, glucose-specific IIBC component n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY3_CLOPF
L3_072_057G1_scaffold_152_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9828..10724)
DNA (897bp) protein (299aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY2_CLOPF
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDT27811.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter substrate-binding protein
L3_072_057G1_scaffold_152_10
unknown

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comp(10770..10943)
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF3_CLOP1
hypothetical protein
L3_072_057G1_scaffold_152_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10950..12533)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIG1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81865.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_152_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12696..13718)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRW6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15591.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_072_057G1_scaffold_152_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13708..14847)
DNA (1140bp) protein (380aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRW5_CLOPF
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT15620.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phosphoesterase
L3_072_057G1_scaffold_152_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15128..15310)
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein 1 n=11 Tax=Clostridium perfringens RepID=SAS0_CLOPE
small acid-soluble protein Ssp1
Small, acid-soluble spore protein 1 {ECO:0000313|EMBL:EIA16363.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_152_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15450..17627)
DNA (2178bp) protein (726aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYU2_CLOPF
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT73174.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
cpdC; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
L3_072_057G1_scaffold_152_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18227..18847)
DNA (621bp) protein (207aa)
CBS domain-containing protein n=7 Tax=Clostridium perfringens RepID=H7CYI7_CLOPF
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:EDT15588.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_057G1_scaffold_152_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19147..19611
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81870.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_152_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19605..20309
DNA (705bp) protein (235aa)
Probable glycoprotein endopeptidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF6_CLOPE
glycoprotease
Probable glycoprotein endopeptidase {ECO:0000313|EMBL:BAB81871.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_152_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20309..20755
DNA (447bp) protein (149aa)
Ribosomal-protein-alanine N-acetyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF5_CLOPE
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:BAB81872.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_152_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20849..21445)
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CYJ1_CLOPF
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_152_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21793..23955)
DNA (2163bp) protein (721aa)
RNA-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYT6_CLOPF
RNA-binding protein {ECO:0000313|EMBL:EDT73286.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_072_057G1_scaffold_152_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24067..25410
DNA (1344bp) protein (448aa)
Peptidase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R702_CLOPF
Peptidase family protein {ECO:0000313|EMBL:EDT23961.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
peptidase
L3_072_057G1_scaffold_152_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25658..26629)
DNA (972bp) protein (324aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R703_CLOPF
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
prfB; peptide chain release factor 2
L3_072_057G1_scaffold_152_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26631..26753)
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_057G1_scaffold_152_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27006..29528)
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=4 Tax=Clostridium perfringens RepID=SECA_CLOP1
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_152_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29765..30304)
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_152_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30757..31416)
DNA (660bp) protein (220aa)
ComF protein, homolog n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG0_CLOPF
ComF protein, homolog {ECO:0000313|EMBL:EDT27017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
competence protein FC
L3_072_057G1_scaffold_152_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31392..32354)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGF9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81880.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_152_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32372..34606)
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Exodeoxyribonuclease V alpha subunit n=3 Tax=Clostridium perfringens RepID=Q8XIE6_CLOPE
recD; RecD/TraA family helicase
L3_072_057G1_scaffold_152_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34743..35879
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridium perfringens RepID=B1BKB9_CLOPF
Displaying 30 items

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