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L3_072_057G1_scaffold_169

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Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_169_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(289..1173)
DNA (885bp) protein (295aa)
Xanthosine operon regulatory protein n=48 Tax=Escherichia coli RepID=Q0TF63_ECOL5
DNA-binding transcriptional activator XapR
LysR substrate binding domain-containing protein {ECO:0000313|EMBL:EGB72502.1}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
L3_072_057G1_scaffold_169_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1425..2681)
DNA (1257bp) protein (419aa)
Xanthosine permease n=387 Tax=Escherichia RepID=E2QPP1_ECOLX
xanthosine transport protein
Xanthosine permease {ECO:0000313|EMBL:EOV05572.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L3_072_057G1_scaffold_169_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2742..3488)
DNA (747bp) protein (249aa)
purine nucleoside phosphorylase (EC:2.4.2.-)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CAR03868.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Purine nucleoside phosphorylase n=20 Tax=Escherichia coli RepID=E1S4R6_ECOUM
L3_072_057G1_scaffold_169_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3736..4500
DNA (765bp) protein (255aa)
Uncharacterized protein yfen n=359 Tax=Escherichia RepID=E2QPP3_ECOLX
hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:ELJ70004.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_057G1_scaffold_169_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4539..5465)
DNA (927bp) protein (309aa)
Uncharacterized HTH-type transcriptional regulator YfeR n=529 Tax=Enterobacteriaceae RepID=YFER_ECOLI
yfeR; putative DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EFZ55986.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_072_057G1_scaffold_169_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5555..6553
DNA (999bp) protein (333aa)
Sodium:bile acid symporter family protein n=735 Tax=Enterobacteriaceae RepID=B5YZV6_ECO5E
yfeH; cytochrome oxidase
Putative cytochrome oxidase {ECO:0000313|EMBL:AAG57528.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L3_072_057G1_scaffold_169_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6550..6768)
DNA (219bp) protein (73aa)
Uncharacterized protein ypeB n=48 Tax=Escherichia coli RepID=E2QPP6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD33404.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_072_057G1_scaffold_169_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6770..8785)
DNA (2016bp) protein (672aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=48 Tax=Escherichia coli RepID=DNLJ_ECOL5
L3_072_057G1_scaffold_169_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8856..9854)
DNA (999bp) protein (333aa)
Cell division protein ZipA homolog n=16 Tax=Escherichia coli RepID=ZIPA_ECOL5
cell division protein ZipA
Cell division protein ZipA homolog {ECO:0000255|HAMAP-Rule:MF_00509}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
L3_072_057G1_scaffold_169_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10084..10845
DNA (762bp) protein (254aa)
Protein CysZ n=172 Tax=Escherichia coli RepID=CYSZ_ECO81
cysZ; putative sulfate transport protein CysZ
Sulfate transporter CysZ {ECO:0000256|HAMAP-Rule:MF_00468}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_072_057G1_scaffold_169_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11030..12001
DNA (972bp) protein (324aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
Cysteine synthase A n=1324 Tax=Enterobacteriaceae RepID=CYSK_ECO57
cysteine synthase A
L3_072_057G1_scaffold_169_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12385..12642
DNA (258bp) protein (86aa)
Phosphocarrier protein HPr n=2066 Tax=Enterobacteriaceae RepID=PTHP_ECO57
PTS sugar transporter
Phosphocarrier protein HPr {ECO:0000313|EMBL:ESD28963.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_072_057G1_scaffold_169_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12687..14414
DNA (1728bp) protein (576aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=924 Tax=Enterobacteriaceae RepID=C3T127_ECOLX
L3_072_057G1_scaffold_169_14
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14455..14964
DNA (510bp) protein (170aa)
Glucose-specific phosphotransferase enzyme IIA component n=1358 Tax=Enterobacteriaceae RepID=PTGA_ECOL6
glucose-specific PTS system component
Glucose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EOW63309.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
L3_072_057G1_scaffold_169_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15007..15858)
DNA (852bp) protein (284aa)
pdxK; pyridoxal kinase (EC:2.7.1.35)
Pyridoxine kinase {ECO:0000256|HAMAP-Rule:MF_01638}; EC=2.7.1.35 {ECO:0000256|HAMAP-Rule:MF_01638};; PN/PL/PM kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Pyridoxal kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Pyridoxamine kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Vitamin B6 kinase {ECO:0000256|HAMAP-Rule:MF_01638}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Pyridoxine kinase n=360 Tax=Escherichia RepID=PDXK_ECO45
L3_072_057G1_scaffold_169_16
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16057..16332
DNA (276bp) protein (92aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=D8BQJ1_ECOLX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI94881.1}; TaxID=766142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 155-74.;"
L3_072_057G1_scaffold_169_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16335..17246)
DNA (912bp) protein (304aa)
cysM; cysteine synthase B (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Cysteine synthase B n=22 Tax=Escherichia coli RepID=Q0TF46_ECOL5
L3_072_057G1_scaffold_169_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17381..18478)
DNA (1098bp) protein (366aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
Sulfate/thiosulfate ABC transporter, ATP-binding protein n=16 Tax=Escherichia coli RepID=B3HUK6_ECOLX
sulfate/thiosulfate transporter subunit
L3_072_057G1_scaffold_169_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18468..19343)
DNA (876bp) protein (292aa)
Sulfate transport system permease protein CysW n=857 Tax=Enterobacteriaceae RepID=CYSW_ECOL6
Sulfate transport system permease protein
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:EFK72428.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_072_057G1_scaffold_169_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19343..20176)
DNA (834bp) protein (278aa)
Sulfate transport system permease protein cysT n=259 Tax=Escherichia RepID=E2QPQ9_ECOLX
cysU; Sulfate transport system permease protein cysT
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:EHU44353.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_072_057G1_scaffold_169_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20176..21192)
DNA (1017bp) protein (339aa)
Thiosulfate-binding protein n=47 Tax=Escherichia coli RepID=Q0TF42_ECOL5
thiosulfate transporter subunit
Thiosulfate-binding protein {ECO:0000313|EMBL:EGI15088.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_072_057G1_scaffold_169_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21350..22141)
DNA (792bp) protein (264aa)
Oxidoreductase ucpA {ECO:0000313|EMBL:EMX31238.1}; EC=1.-.-.- {ECO:0000313|EMBL:EMX31238.1};; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Oxidoreductase ucpA n=474 Tax=Enterobacteriaceae RepID=E2QPR1_ECOLX
short chain dehydrogenase
L3_072_057G1_scaffold_169_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22329..23225
DNA (897bp) protein (299aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000255|HAMAP-Rule:MF_00068}; Short=MurNAc-6-P etherase {ECO:0000255|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000255|HAMAP-Rule:MF_00068};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000255|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000255|HAMAP-Rule:MF_00068}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
N-acetylmuramic acid 6-phosphate etherase n=178 Tax=Escherichia coli RepID=MURQ_ECOL5
murQ; N-acetylmuramic acid 6-phosphate etherase
L3_072_057G1_scaffold_169_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23229..24653
DNA (1425bp) protein (475aa)
murP; N-acetylmuramic acid phosphotransfer permease (EC:2.7.1.69)
PTS system, N-acetylmuramic acid-specific EIIBC component n=38 Tax=Escherichia RepID=B3HUL2_ECOLX
PTS system N-acetylmuramic acid-specific EIIBC component (EIIBC-MurNAc) {ECO:0000313|EMBL:EGI15091.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_072_057G1_scaffold_169_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24831..25730)
DNA (900bp) protein (300aa)
Uncharacterized protein n=843 Tax=Enterobacteriaceae RepID=J7Q8S2_ECOLX
yfeX; dyp-type peroxidase family protein
Dyp-type peroxidase {ECO:0000313|EMBL:EOV72526.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_072_057G1_scaffold_169_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25826..26401)
DNA (576bp) protein (192aa)
Uncharacterized protein yfeY n=316 Tax=Escherichia RepID=E2QPR5_ECOLX
yfeY; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ39159.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_072_057G1_scaffold_169_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26462..26911)
DNA (450bp) protein (150aa)
Inner membrane protein yfeZ n=396 Tax=Escherichia RepID=E2QPR6_ECOLX
hypothetical protein
Inner membrane protein yfeZ {ECO:0000313|EMBL:EOU65865.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_072_057G1_scaffold_169_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26898..27323)
DNA (426bp) protein (142aa)
Acetyltransferase YpeA {ECO:0000255|HAMAP-Rule:MF_01127}; EC=2.3.1.- {ECO:0000255|HAMAP-Rule:MF_01127};; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Acetyltransferase YpeA n=22 Tax=Escherichia coli RepID=YPEA_ECOL5
acetyltransferase
L3_072_057G1_scaffold_169_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27537..28406
DNA (870bp) protein (290aa)
N-acetylmuramoyl-l-alanine amidase I n=176 Tax=Escherichia coli RepID=B7N301_ECO81
amiA; N-acetylmuramoyl-l-alanine amidase I
N-acetylmuramoyl-L-alanine amidase AmiA {ECO:0000313|EMBL:ELE54484.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_072_057G1_scaffold_169_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28407..29309
DNA (903bp) protein (301aa)
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333, ECO:0000313|EMBL:CKG84288.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Coproporphyrinogen-III oxidase, aerobic n=12 Tax=Escherichia coli RepID=L3Z7T6_ECOLX
Displaying items 1-30 of 118 in total

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