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L3_072_057G1_scaffold_199

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_199_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..772
DNA (771bp) protein (257aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TJ04_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EKQ51380.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
N-acetylmuramoyl-L-alanine amidase
L3_072_057G1_scaffold_199_2
unknown

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comp(1569..1814)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_072_057G1_scaffold_199_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2329..3930
DNA (1602bp) protein (534aa)
Na/Pi-cotransporter family protein/PhoU family protein n=2 Tax=Clostridium botulinum E RepID=B2UYE7_CLOBA
Na/Pi-cotransporter family protein/PhoU family protein
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KIL08577.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_057G1_scaffold_199_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4031..4681
DNA (651bp) protein (217aa)
cwlD; N-acetylmuramoyl-L-alanine amidase CwlD (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TKK7_9CLOT
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EKQ52170.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_072_057G1_scaffold_199_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4822..5664
DNA (843bp) protein (281aa)
putative fumarate hydratase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TYF7_9CLOT
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily {ECO:0000313|EMBL:EKQ52172.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_072_057G1_scaffold_199_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5674..6237
DNA (564bp) protein (188aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPV0_CLOB8
fumarate hydratase
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ABR32380.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_057G1_scaffold_199_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6254..7111)
DNA (858bp) protein (286aa)
Putative membrane protein n=2 Tax=Clostridium botulinum E RepID=B2UYF3_CLOBA
transporter
Membrane protein {ECO:0000313|EMBL:KIL08582.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_057G1_scaffold_199_8
unknown

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7240..7404
DNA (165bp) protein (55aa)

This feature has no annotations

L3_072_057G1_scaffold_199_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7491..8180
DNA (690bp) protein (230aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1QZU8_CLOBU
DNA-binding response regulator {ECO:0000313|EMBL:KJZ94288.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
two component transcriptional regulator
L3_072_057G1_scaffold_199_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8152..9975
DNA (1824bp) protein (608aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCK5_9CLOT
his Kinase A domain protein
L3_072_057G1_scaffold_199_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10163..12433
DNA (2271bp) protein (757aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, alpha subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEC7_9CLOT
L3_072_057G1_scaffold_199_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12455..13489
DNA (1035bp) protein (345aa)
nrdB; ribonucleoside-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUX1_9CLOT
L3_072_057G1_scaffold_199_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13715..15334
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ptsP; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8P7_9CLOT
L3_072_057G1_scaffold_199_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15587..16123
DNA (537bp) protein (179aa)
chromate transporter n=1 Tax=Clostridium botulinum RepID=UPI00030E2D33
chrA; chromate transport protein
Chromate transporter {ECO:0000313|EMBL:KJU71475.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_072_057G1_scaffold_199_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16123..16653
DNA (531bp) protein (177aa)
Chromate ion transporter (CHR) family chromate transporter n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H679_9CLOT
Chromate transporter {ECO:0000313|EMBL:KJU71474.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
chromate transporter family protein
L3_072_057G1_scaffold_199_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16654..17883
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003711B48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08591.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_057G1_scaffold_199_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17899..19071
DNA (1173bp) protein (391aa)
iadA; isoaspartyl dipeptidase IadA (EC:3.4.19.-)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Isoaspartyl dipeptidase IadA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPC8_CLOSA
L3_072_057G1_scaffold_199_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19098..19667)
DNA (570bp) protein (190aa)
Spore-cortex-lytic enzyme, sleb n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UT36_CLOBO
Spore-cortex-lytic enzyme, sleb {ECO:0000313|EMBL:EES50540.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
spore-cortex-lytic enzyme, sleb
L3_072_057G1_scaffold_199_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19730..20716)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKG5_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41304.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_057G1_scaffold_199_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20891..21745
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG03050.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
disA bacterial checkpoint controller nucleotide-binding family protein
L3_072_057G1_scaffold_199_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21715..22935
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LMM0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54055.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_057G1_scaffold_199_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23030..24631
DNA (1602bp) protein (534aa)
Putative Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPI3_9CLOT
Putative Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDG03052.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
FAD dependent oxidoreductase family protein
L3_072_057G1_scaffold_199_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24795..25703
DNA (909bp) protein (303aa)
ptb; phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase {ECO:0000313|EMBL:EES50916.1}; EC=2.3.1.19 {ECO:0000313|EMBL:EES50916.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Phosphate butyryltransferase n=4 Tax=Clostridium botulinum RepID=B2TIN3_CLOBB
L3_072_057G1_scaffold_199_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25730..26797
DNA (1068bp) protein (356aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
buk; butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKS3_9CLOT
L3_072_057G1_scaffold_199_25
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26873..27694)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BBD0_CLOBO
Lipoprotein {ECO:0000313|EMBL:KAJ49226.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
Displaying 25 items

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