ggKbase home page

L3_072_057G1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_208_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92..379
DNA (288bp) protein (96aa)
Uncharacterized protein n=160 Tax=Escherichia coli RepID=G4VUI7_ECOLX
yubO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ71404.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_072_057G1_scaffold_208_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

498..1319
DNA (822bp) protein (274aa)
Uncharacterized protein n=103 Tax=Escherichia coli RepID=B7LJ65_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ62437.1}; TaxID=439184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli RS218.;"
L3_072_057G1_scaffold_208_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1615..2124)
DNA (510bp) protein (170aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=C8CGP5_ECOLX
lytic transglycosylase
X polypeptide {ECO:0000313|EMBL:ELC41917.1}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
L3_072_057G1_scaffold_208_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2548..2931
DNA (384bp) protein (128aa)
IncF plasmid conjugative transfer mating signal transduction protein TraM n=117 Tax=Escherichia coli RepID=C8CGP6_ECOLX
TraM protein
IncF plasmid conjugative transfer mating signal transduction protein TraM {ECO:0000313|EMBL:ACU68816.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_057G1_scaffold_208_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3125..3586
DNA (462bp) protein (154aa)
PAS fold family protein n=1 Tax=Escherichia coli DEC9D RepID=H5CFV2_ECOLX
TraJ
Protein traJ {ECO:0000313|EMBL:KDZ36166.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_072_057G1_scaffold_208_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4077..4436
DNA (360bp) protein (120aa)
IncF plasmid conjugative transfer pilin protein TraA n=109 Tax=Escherichia coli RepID=C8CGP8_ECOLX
conjugal transfer pilin subunit TraA
Conjugal transfer protein TraA {ECO:0000313|EMBL:AIZ62442.1}; TaxID=439184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli RS218.;"
L3_072_057G1_scaffold_208_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4451..4762
DNA (312bp) protein (104aa)
IncF plasmid conjugative transfer pilus assembly protein TraL n=147 Tax=Enterobacteriaceae RepID=C8CGP9_ECOLX
traL; conjugal transfer protein TraL
Type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:ESK23455.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_072_057G1_scaffold_208_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4784..5350
DNA (567bp) protein (189aa)
IncF plasmid conjugative transfer pilus assembly protein TraE n=106 Tax=Enterobacteriaceae RepID=C8CGQ0_ECOLX
traE; conjugal transfer protein TraE
Protein traE {ECO:0000313|EMBL:EOW22559.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L3_072_057G1_scaffold_208_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5337..6065
DNA (729bp) protein (243aa)
Type-F conjugative transfer system secretin TraK n=2 Tax=Escherichia coli RepID=L3XYC6_ECOLX
traK; conjugal transfer protein TraK
Type-F conjugative transfer system secretin TraK {ECO:0000313|EMBL:EQN14080.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_072_057G1_scaffold_208_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6065..7492
DNA (1428bp) protein (476aa)
TraB n=1 Tax=Escherichia coli RepID=G3G3R2_ECOLX
traB; conjugal transfer pilus assembly protein TraB
TraB pilus assembly protein {ECO:0000313|EMBL:ESD48971.1}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907889.;"
L3_072_057G1_scaffold_208_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7482..8072
DNA (591bp) protein (197aa)
IncF plasmid conjugative transfer protein TraP n=154 Tax=Enterobacteriaceae RepID=B1VC91_ECOLX
traP; conjugal transfer protein TraP
TraP protein {ECO:0000313|EMBL:ESA95354.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_072_057G1_scaffold_208_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8059..8379
DNA (321bp) protein (107aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=B7LJ52_ECOLU
conjugal transfer protein TrbD
Conjugal transfer protein TrbD {ECO:0000313|EMBL:EOU68782.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_072_057G1_scaffold_208_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8621..9136
DNA (516bp) protein (172aa)
IncF plasmid conjugative transfer pilus assembly protein TraV n=62 Tax=Escherichia coli RepID=C8CGQ5_ECOLX
TraV protein
Protein TraV {ECO:0000313|EMBL:ELC41929.1}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
L3_072_057G1_scaffold_208_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9271..9492
DNA (222bp) protein (74aa)
TraR n=138 Tax=Bacteria RepID=D4HR10_KLEPN
traR; conjugal transfer protein TraR
Conjugal transfer protein TraR {ECO:0000313|EMBL:ABE10690.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_072_057G1_scaffold_208_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9485..9958
DNA (474bp) protein (158aa)
Uncharacterized protein n=126 Tax=Escherichia RepID=C8CGQ6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ71376.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_072_057G1_scaffold_208_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10004..10465)
DNA (462bp) protein (154aa)
Uncharacterized protein n=106 Tax=Escherichia coli RepID=L3CP47_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP40963.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_057G1_scaffold_208_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10623..13253
DNA (2631bp) protein (877aa)
Conjugal transfer ATP-binding protein TraC n=25 Tax=Enterobacteriaceae RepID=Q6SJ14_ECOLX
Protein traC {ECO:0000313|EMBL:EOU68788.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
traC; conjugal transfer protein TraC
L3_072_057G1_scaffold_208_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13250..13636
DNA (387bp) protein (129aa)
Type-F conjugative transfer system protein TrbI n=9 Tax=Escherichia coli RepID=D8C506_ECOLX
Type-F conjugative transfer system protein TrbI {ECO:0000313|EMBL:ESK23443.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
trbI; conjugal transfer protein TrbI
L3_072_057G1_scaffold_208_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13633..14265
DNA (633bp) protein (211aa)
Type-F conjugative transfer system protein TraW n=12 Tax=Escherichia coli RepID=D8C507_ECOLX
Type-F conjugative transfer system protein TraW {ECO:0000313|EMBL:ESD48921.1}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907889.;"
traW; conjugal transfer pilus assembly protein TraW
L3_072_057G1_scaffold_208_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14262..15254
DNA (993bp) protein (331aa)
TraU n=220 Tax=Bacteria RepID=D9Z589_ECOLX
traU; conjugal transfer protein TraU
TraU family protein {ECO:0000313|EMBL:KEN82198.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L3_072_057G1_scaffold_208_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15284..15589
DNA (306bp) protein (102aa)
Uncharacterized protein n=122 Tax=Enterobacteriaceae RepID=G3K1J1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOU86149.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_072_057G1_scaffold_208_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15598..16236
DNA (639bp) protein (213aa)
IncF plasmid conjugative transfer protein TrbC n=119 Tax=Escherichia RepID=C8CGR2_ECOLX
TrbC protein
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:EFJ71384.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_072_057G1_scaffold_208_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16233..18083
DNA (1851bp) protein (617aa)
Type-F conjugative transfer system mating-pair stabilization protein TraN n=6 Tax=Escherichia coli RepID=L2XRF9_ECOLX
Type-F conjugative transfer system mating-pair stabilization protein TraN {ECO:0000313|EMBL:EOU68794.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
conjugal transfer mating pair stabilization protein TraN
L3_072_057G1_scaffold_208_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18110..18367
DNA (258bp) protein (86aa)
Conjugal transfer protein TrbE n=19 Tax=Escherichia coli RepID=V0VXL2_ECOLX
IncF plasmid conjugative transfer protein TrbE {ECO:0000313|EMBL:CDK78125.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
trbE; conjugal transfer protein TrbE
L3_072_057G1_scaffold_208_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18360..19103
DNA (744bp) protein (248aa)
IncF plasmid conjugative transfer pilus assembly protein TraF n=119 Tax=Escherichia coli RepID=C8CGR5_ECOLX
traF; conjugal transfer protein TraF
Conjugal transfer protein TraF {ECO:0000313|EMBL:KJW54133.1}; IncF plasmid conjugative transfer pilus assembly protein TraF {ECO:0000313|EMBL:ACU68835.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_057G1_scaffold_208_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19117..19458
DNA (342bp) protein (114aa)
TrbA n=82 Tax=Enterobacteriaceae RepID=G3G3S9_ECOLX
Putative membrane protein {ECO:0000313|EMBL:KDX82804.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
conjugal transfer protein TrbA
L3_072_057G1_scaffold_208_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19439..19774)
DNA (336bp) protein (112aa)
ArtA n=155 Tax=Enterobacteriaceae RepID=G3G3T0_ECOLX
ArtA
Putative membrane protein {ECO:0000313|EMBL:KDX82805.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L3_072_057G1_scaffold_208_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19855..20139
DNA (285bp) protein (95aa)
IncF plasmid conjugative transfer protein TraQ n=166 Tax=Enterobacteriaceae RepID=C8CGR7_ECOLX
TraQ; conjugal transfer protein TraQ
Type-F conjugative transfer system pilin chaperone TraQ {ECO:0000313|EMBL:EFI89703.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
L3_072_057G1_scaffold_208_29
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20126..20671
DNA (546bp) protein (182aa)
Conjugal transfer protein n=59 Tax=Enterobacteriaceae RepID=Q6SJ03_ECOLX
TrbB protein {ECO:0000313|EMBL:BAA78876.1}; TaxID=1288825 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2b.;"
conjugal transfer protein TrbB
L3_072_057G1_scaffold_208_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20929..21321
DNA (393bp) protein (131aa)
Conjugal transfer protein TrbF n=9 Tax=Escherichia coli RepID=V0W1D4_ECOLX
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EYY72540.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
trbF; conjugal transfer protein TrbF
Displaying items 1-30 of 50 in total

View Taxonomy