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L3_072_057G1_scaffold_258

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_258_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(521..3088)
DNA (2568bp) protein (856aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUH2_CLOPF
Cell wall surface anchor family protein {ECO:0000313|EMBL:ABG85323.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
cell wall surface anchor family protein
L3_072_057G1_scaffold_258_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3567..4418)
DNA (852bp) protein (284aa)
Putative dihydrolipoamide acyltransferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNU1_CLOPF
Putative dihydrolipoamide acyltransferase {ECO:0000313|EMBL:EDT16797.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
2-oxoacid dehydrogenases acyltransferase family protein
L3_072_057G1_scaffold_258_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4788..8048)
DNA (3261bp) protein (1087aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20029.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
zinc metalloprotease ZmpB
L3_072_057G1_scaffold_258_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8221..8388)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H292_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71670.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
F5/8 type C domain protein
L3_072_057G1_scaffold_258_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9613..11247)
DNA (1635bp) protein (545aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTT9_CLOP1
von Willebrand factor type A domain protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:AIY82394.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_057G1_scaffold_258_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11260..11874)
DNA (615bp) protein (205aa)
Alternate signal-mediated exported , CPF_0494 family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQC3_CLOBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84232.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_057G1_scaffold_258_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11874..12506)
DNA (633bp) protein (211aa)
Conserved domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVP0_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84230.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_057G1_scaffold_258_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12532..13161)
DNA (630bp) protein (210aa)
Alternate signal-mediated exported protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTV5_CLOPF
alternate signal-mediated exported , family protein
Alternate signal-mediated exported, family protein {ECO:0000313|EMBL:AIY82661.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_057G1_scaffold_258_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13177..13701)
DNA (525bp) protein (175aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDD5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KJU72115.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_072_057G1_scaffold_258_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14790..15518)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037DA6C1
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:CEP94828.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
response regulator
L3_072_057G1_scaffold_258_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15817..17148)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035E422B
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:CEP94830.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
GHKL domain protein
L3_072_057G1_scaffold_258_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17347..18075)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037DA6C1
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:CEP94828.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
response regulator
L3_072_057G1_scaffold_258_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18107..18361)
DNA (255bp) protein (85aa)
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CEO36672.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_072_057G1_scaffold_258_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19250..19651)
DNA (402bp) protein (134aa)
Rrf2 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJA4_9FIRM
RrF2 family protein {ECO:0000313|EMBL:CEO36664.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
rrf2 family protein (putative transcriptional regulator)
L3_072_057G1_scaffold_258_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20213..20908)
DNA (696bp) protein (232aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TU76_CLOP1
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EIA18471.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 15 items

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