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L3_072_057G1_scaffold_321

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_321_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..661
DNA (660bp) protein (220aa)
L-asparaginase (EC:3.5.1.1)
L-asparaginase {ECO:0000313|EMBL:EDT14044.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EDT14044.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L-asparaginase n=9 Tax=Clostridium perfringens RepID=Q0TPK2_CLOP1
L3_072_057G1_scaffold_321_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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919..2316
DNA (1398bp) protein (466aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CXE6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16601.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_321_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2536..3420
DNA (885bp) protein (295aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CXE5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81456.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_321_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3434..3703
DNA (270bp) protein (90aa)
UPF0296 protein CPR_1720 n=11 Tax=Clostridium perfringens RepID=Y1720_CLOPS
hypothetical protein
UPF0296 protein CPR_1720 {ECO:0000255|HAMAP-Rule:MF_01503}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_057G1_scaffold_321_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3696..4343
DNA (648bp) protein (216aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Guanylate kinase n=16 Tax=Clostridium perfringens RepID=KGUA_CLOP1
L3_072_057G1_scaffold_321_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4324..4536
DNA (213bp) protein (71aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DNA-directed RNA polymerase subunit omega n=11 Tax=Clostridium perfringens RepID=RPOZ_CLOP1
L3_072_057G1_scaffold_321_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4542..5729
DNA (1188bp) protein (396aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EDS81256.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDS81256.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EDS81256.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFW7_CLOPF
L3_072_057G1_scaffold_321_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5768..7963
DNA (2196bp) protein (732aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Primosomal protein N' n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CS81_CLOPF
priA; primosome assembly protein PriA
L3_072_057G1_scaffold_321_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7977..8420
DNA (444bp) protein (148aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Peptide deformylase n=5 Tax=Clostridium perfringens RepID=Q0TPL0_CLOP1
L3_072_057G1_scaffold_321_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8440..9369
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=3 Tax=Clostridium perfringens RepID=H7CXD8_CLOPF
L3_072_057G1_scaffold_321_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9387..10082
DNA (696bp) protein (232aa)
Putative neutral zinc metallopeptidase n=2 Tax=Clostridium perfringens RepID=B1R8F5_CLOPF
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:EDT23449.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
neutral zinc metallopeptidase
L3_072_057G1_scaffold_321_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10093..11421
DNA (1329bp) protein (443aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Ribosomal RNA small subunit methyltransferase B n=4 Tax=Clostridium perfringens RepID=B1R8F6_CLOPF
RNA-binding Sun protein
L3_072_057G1_scaffold_321_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11453..12496
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Probable dual-specificity RNA methyltransferase RlmN n=7 Tax=Clostridium perfringens RepID=RLMN_CLOP1
ribosomal RNA large subunit methyltransferase N
L3_072_057G1_scaffold_321_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12509..13228
DNA (720bp) protein (240aa)
Protein phosphatase family protein n=6 Tax=Clostridium perfringens RepID=H7CXD4_CLOPF
protein phosphatase 2C
Protein phosphatase family protein {ECO:0000313|EMBL:EIA16589.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_057G1_scaffold_321_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13230..15311
DNA (2082bp) protein (694aa)
Protein kinase n=2 Tax=Clostridium perfringens RepID=Q0TPL6_CLOP1
protein kinase
Protein kinase {ECO:0000313|EMBL:EDT23504.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying 15 items

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