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L3_072_057G1_scaffold_338

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_338_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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333..1142
DNA (810bp) protein (270aa)
Capsule chain length determinant protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVR9_CLOPS
chain length determinant protein
Capsule chain length determinant protein {ECO:0000313|EMBL:ABG87233.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_057G1_scaffold_338_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1093..1737
DNA (645bp) protein (215aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDF9_CLOPF
capsule synthesis gene
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABG87749.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_057G1_scaffold_338_3
unknown

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1832..2416
DNA (585bp) protein (195aa)

This feature has no annotations

L3_072_057G1_scaffold_338_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2486..3568
DNA (1083bp) protein (361aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=3 Tax=Clostridium perfringens RepID=B1BF63_CLOPF
L3_072_057G1_scaffold_338_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3565..4128
DNA (564bp) protein (188aa)
Probable cobinamide kinase/cobinamide phosphate guanylyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLK6_CLOPE
hypothetical protein
Probable cobinamide kinase/cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:BAB80741.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_338_6
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4103..4855
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
Cobalamin synthase n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W482_9FIRM
cobalamin-5-phosphate synthase family protein
L3_072_057G1_scaffold_338_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4866..5246
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QD20_9CLOT
cobinamide kinase / cobinamide phosphate guanyltransferase family protein
Cobinamide kinase / cobinamide phosphate guanyltransferase family protein {ECO:0000313|EMBL:AIY83291.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_057G1_scaffold_338_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5239..5838
DNA (600bp) protein (200aa)
Phosphoglycerate mutase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V574_CLOPF
Alpha-ribazole phosphatase {ECO:0000313|EMBL:KJU71095.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
histidine phosphatase super family protein
L3_072_057G1_scaffold_338_9
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5842..6783
DNA (942bp) protein (314aa)
cobD; cobalamin biosynthesis protein CobD (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=2 Tax=Turicibacter RepID=D4W479_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
L3_072_057G1_scaffold_338_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6783..7847
DNA (1065bp) protein (355aa)
threonine-phosphate decarboxylase (EC:4.1.1.81)
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:AIY82787.1}; EC=4.1.1.81 {ECO:0000313|EMBL:AIY82787.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Threonine-phosphate decarboxylase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQA9_CLOPF
L3_072_057G1_scaffold_338_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7844..8824
DNA (981bp) protein (327aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form n=2 Tax=Turicibacter RepID=D4W477_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJU71092.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase family protein
L3_072_057G1_scaffold_338_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9181..10092
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98887.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
periplasmic binding protein
L3_072_057G1_scaffold_338_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10085..11110
DNA (1026bp) protein (342aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF54_CLOPF
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDS81556.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter permease
L3_072_057G1_scaffold_338_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11076..11870
DNA (795bp) protein (265aa)
iron ABC transporter n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A1ADA
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein {ECO:0000313|EMBL:EDT25963.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
iron(III) dicitrate transport system
L3_072_057G1_scaffold_338_15
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11877..12521
DNA (645bp) protein (215aa)
Conserved domain protein n=2 Tax=Turicibacter RepID=D4W472_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EFF64252.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
hypothetical protein
L3_072_057G1_scaffold_338_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12531..13985
DNA (1455bp) protein (485aa)
Cobyric acid synthase n=2 Tax=Clostridium perfringens RepID=H7CVA4_CLOPF
cobQ; cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_072_057G1_scaffold_338_17
unknown

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14090..14650
DNA (561bp) protein (187aa)

This feature has no annotations

L3_072_057G1_scaffold_338_18
unknown

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14668..14811
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 18 items

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