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L3_072_057G1_scaffold_475

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_057G1_scaffold_475_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..198
DNA (198bp) protein (66aa)
UvrABC system protein C n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNV5_CLOPF
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_072_057G1_scaffold_475_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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348..1262
DNA (915bp) protein (305aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=7 Tax=Clostridium perfringens RepID=MURB_CLOP1
L3_072_057G1_scaffold_475_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1502..2446
DNA (945bp) protein (315aa)
UPF0042 nucleotide-binding protein CPR_0335 n=9 Tax=Clostridium perfringens RepID=Y335_CLOPS
hypothetical protein
Nucleotide-binding protein CPE0354 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_475_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2386..3729
DNA (1344bp) protein (448aa)
Putative gluconeogenesis factor n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW35_CLOPS
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_057G1_scaffold_475_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3732..4682
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=9 Tax=Clostridium perfringens RepID=WHIA_CLOP1
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_057G1_scaffold_475_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4856..5410
DNA (555bp) protein (185aa)
Putative lioprotein n=4 Tax=Clostridium perfringens RepID=H7CSE0_CLOPF
Putative lioprotein {ECO:0000313|EMBL:EIA18462.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lioprotein
L3_072_057G1_scaffold_475_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5544..6788)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDR4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27914.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_072_057G1_scaffold_475_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6802..7338)
DNA (537bp) protein (179aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridium perfringens RepID=H1CUN4_CLOPF
RNA polymerase ECF-type sigma factor
Probable RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAB80065.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_057G1_scaffold_475_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7806..9239
DNA (1434bp) protein (478aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNU9_CLOPF
Displaying 9 items

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