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L3_072_123G1_scaffold_3

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Displaying items 1-30 of 434 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_3_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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639..2102
DNA (1464bp) protein (488aa)
PilV-like protein n=141 Tax=Escherichia coli RepID=G7RAX3_ECOC2
PilV-like protein
Uncharacterized protein {ECO:0000313|EMBL:EQP55407.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2217..4037)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=147 Tax=Escherichia RepID=G7RAX2_ECOC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP55406.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4151..5371)
DNA (1221bp) protein (407aa)
P4 family integrase n=155 Tax=Escherichia RepID=G7RAX1_ECOC2
P4 family integrase
Uncharacterized protein {ECO:0000313|EMBL:EQP55405.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6219..6869)
DNA (651bp) protein (217aa)
Metal-binding protein n=29 Tax=Escherichia coli RepID=B3HVI1_ECOLX
hypothetical protein
Metal-binding protein ZinT {ECO:0000313|EMBL:ENH09264.1}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
L3_072_123G1_scaffold_3_5
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7127..7762)
DNA (636bp) protein (212aa)
Sulfoxide reductase heme-binding subunit YedZ n=138 Tax=Enterobacteriaceae RepID=YEDZ_SHIFL
yedZ; putative sulfite oxidase subunit YedZ,Flavocytochrome yedZ,putative sulfite oxidase subunit YedZ,Ferric reductase like transmembrane component
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_072_123G1_scaffold_3_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7763..8767)
DNA (1005bp) protein (335aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Sulfoxide reductase catalytic subunit YedY n=105 Tax=Enterobacteriaceae RepID=YEDY_ECO7I
yedY; membrane-anchored, periplasmic TMAO, DMSO reductase
L3_072_123G1_scaffold_3_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8876..9289)
DNA (414bp) protein (138aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
5-hydroxyisourate hydrolase n=490 Tax=Enterobacteriaceae RepID=E2QNG1_ECOLX
Transthyretin-like protein
L3_072_123G1_scaffold_3_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9311..10093
DNA (783bp) protein (261aa)
Two-component system response regulator n=2 Tax=Escherichia coli RepID=T6I2V2_ECOLX
yedW; Putative transcriotional regulator
Transcriptional activator protein CopR {ECO:0000313|EMBL:EGI15424.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_072_123G1_scaffold_3_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10093..11451
DNA (1359bp) protein (453aa)
sensor-like histidine kinase YedV (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
Heavy metal sensor histidine kinase n=30 Tax=Escherichia coli RepID=B3HVI6_ECOLX
L3_072_123G1_scaffold_3_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11559..12410)
DNA (852bp) protein (284aa)
Molecular chaperone Hsp31 and glyoxalase 3 {ECO:0000256|HAMAP-Rule:MF_01046}; EC=4.2.1.130 {ECO:0000256|HAMAP-Rule:MF_01046};; Glyoxalase III {ECO:0000256|HAMAP-Rule:MF_01046}; Holdase {ECO:0000256|HAMAP-Rule:MF_01046}; Holding molecular chaperone {ECO:0000256|HAMAP-Rule:MF_01046}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
Molecular chaperone Hsp31 and glyoxalase 3 n=300 Tax=Escherichia RepID=HCHA_ECO7I
yedU; chaperone protein HchA
L3_072_123G1_scaffold_3_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13006..14064)
DNA (1059bp) protein (353aa)
Gram-negative porin n=63 Tax=Escherichia coli RepID=D8BN61_ECOLX
outer membrane pore protein
Outer membrane protein N {ECO:0000313|EMBL:EOV75781.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_072_123G1_scaffold_3_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14322..14411
DNA (90bp) protein (30aa)
Uncharacterized protein n=46 Tax=Escherichia coli RepID=L2UBL8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ28620.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
L3_072_123G1_scaffold_3_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15034..15729
DNA (696bp) protein (232aa)
HD domain protein n=94 Tax=Enterobacteriaceae RepID=D8BN64_ECOLX
yedJ; putative hydrolase, HD superfamily
HD domain protein {ECO:0000313|EMBL:EGK37149.1}; TaxID=766147 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri K-227.;"
L3_072_123G1_scaffold_3_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15796..17214
DNA (1419bp) protein (473aa)
dcm; DNA-cytosine methylase (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Cytosine-specific methyltransferase n=102 Tax=Escherichia coli RepID=E2QNF4_ECOLX
L3_072_123G1_scaffold_3_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17195..17665
DNA (471bp) protein (157aa)
DNA mismatch endonuclease, patch repair protein n=207 Tax=Escherichia RepID=A1ACA7_ECOK1
vsr; DNA mismatch endonuclease of very short patch repair
Short patch repair protein {ECO:0000313|EMBL:EOV75777.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_072_123G1_scaffold_3_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17654..18574)
DNA (921bp) protein (307aa)
Uncharacterized inner membrane transporter YedA n=744 Tax=Enterobacteriaceae RepID=YEDA_ECO57
hypothetical protein
Carboxylate/Amino Acid/Amine Transporter family protein {ECO:0000313|EMBL:EHU46345.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_072_123G1_scaffold_3_17
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18747..19664
DNA (918bp) protein (306aa)
Inner membrane protein yedI n=228 Tax=Enterobacteriaceae RepID=E2QNF1_ECOLX
yedI; putative methyl-independent mismatch repair protein
Uncharacterized protein {ECO:0000313|EMBL:CDX07371.1}; TaxID=623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri.;"
L3_072_123G1_scaffold_3_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19743..19925
DNA (183bp) protein (61aa)
Uncharacterized protein yodC n=326 Tax=Enterobacteriaceae RepID=E2QNF0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP55391.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20096..21790
DNA (1695bp) protein (565aa)
Cellulose synthesis regulatory protein n=47 Tax=Escherichia coli RepID=L2WRD1_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN82515.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_072_123G1_scaffold_3_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21787..22602)
DNA (816bp) protein (272aa)
mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70)
Putative mannosyl-3-phosphoglycerate phosphatase {ECO:0000256|HAMAP-Rule:MF_00617}; Short=MPGP {ECO:0000256|HAMAP-Rule:MF_00617};; EC=3.1.3.70 {ECO:0000256|HAMAP-Rule:MF_00617};; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
Putative mannosyl-3-phosphoglycerate phosphatase n=129 Tax=Escherichia coli RepID=MPGP_ECOL5
L3_072_123G1_scaffold_3_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22898..23125)
DNA (228bp) protein (76aa)
Uncharacterized protein YodD n=1372 Tax=Enterobacteriaceae RepID=YODD_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP64436.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_072_123G1_scaffold_3_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23288..23476
DNA (189bp) protein (63aa)
Protein DsrB n=3 Tax=Escherichia coli RepID=E9XIP5_ECOLX
dsrB; DsrB protein
Protein DsrB {ECO:0000256|HAMAP-Rule:MF_01549, ECO:0000256|SAAS:SAAS00024808}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L3_072_123G1_scaffold_3_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23520..24143)
DNA (624bp) protein (208aa)
DNA-binding transcriptional activator, co-regulator with RcsB n=443 Tax=Enterobacteriaceae RepID=B7NRD0_ECO7I
rcsA; colanic acid capsular biosynthesis activation protein
Transcriptional regulatory protein RcsA {ECO:0000256|HAMAP-Rule:MF_00982}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
L3_072_123G1_scaffold_3_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24433..25218)
DNA (786bp) protein (262aa)
Flagellar biosynthetic protein fliR n=256 Tax=Escherichia RepID=E2QNE4_ECOLX
fliR; flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_072_123G1_scaffold_3_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25227..25496)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1346 Tax=Enterobacteriaceae RepID=FLIQ_ECO57
fliQ; Flagellar biosynthesis protein
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:KDY19453.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L3_072_123G1_scaffold_3_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25506..26243)
DNA (738bp) protein (246aa)
Flagellar biosynthetic protein fliP n=303 Tax=Enterobacteriaceae RepID=E2QNE2_ECOLX
fliP; flagellar biosynthesis protein FliP
Flagellar biosynthetic protein fliP {ECO:0000313|EMBL:EQP55383.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26243..26608)
DNA (366bp) protein (122aa)
Flagellar protein fliO n=264 Tax=Enterobacteriaceae RepID=E2QNE1_ECOLX
flagellar biosynthesis protein FliO
Flagellar protein fliO {ECO:0000313|EMBL:EOW97648.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_123G1_scaffold_3_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26611..27024)
DNA (414bp) protein (138aa)
Flagellar motor switch protein fliN n=198 Tax=Escherichia coli RepID=E2QNE0_ECOLX
fliN; flagellar motor switching and energizing component
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EQP55381.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27021..28025)
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=1239 Tax=Gammaproteobacteria RepID=C3T4T7_ECOLX
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_3_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28030..28494)
DNA (465bp) protein (155aa)
Flagellar FliL protein n=26 Tax=Escherichia coli RepID=Q0TGQ0_ECOL5
fliL; flagellar basal body protein FliL
Flagellar basal body-associated FliL family protein {ECO:0000313|EMBL:KDZ37429.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
Displaying items 1-30 of 434 in total

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