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L3_072_123G1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_32_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127..768)
DNA (642bp) protein (214aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ48_CLOPF
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:EDT73165.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
HAD family hydrolase
L3_072_123G1_scaffold_32_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(852..1226)
DNA (375bp) protein (125aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CY83_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15285.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_32_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1437..2831)
DNA (1395bp) protein (465aa)
glutamate decarboxylase (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Glutamate decarboxylase n=9 Tax=Clostridium perfringens RepID=H7CY84_CLOPF
L3_072_123G1_scaffold_32_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3417..4472)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIQ5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81765.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_32_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4584..6002)
DNA (1419bp) protein (473aa)
Glutamate:gamma aminobutyrate antiporter family protein n=9 Tax=Clostridium perfringens RepID=H7CY86_CLOPF
glutamate:gamma aminobutyrate antiporter family protein
Glutamate:gamma aminobutyrate antiporter family protein {ECO:0000313|EMBL:EDT15260.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_32_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6676..10191)
DNA (3516bp) protein (1172aa)
nifJ; pyruvate-flavodoxin oxidoreductase (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Pyruvate-flavodoxin oxidoreductase n=8 Tax=Clostridium perfringens RepID=Q0TNP9_CLOP1
L3_072_123G1_scaffold_32_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10296..10721)
DNA (426bp) protein (142aa)
Flavodoxin n=11 Tax=Clostridium perfringens RepID=H7CY88_CLOPF
flavodoxin
Flavodoxin {ECO:0000313|EMBL:EDT15279.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_32_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10928..12001)
DNA (1074bp) protein (358aa)
murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=9 Tax=Clostridium perfringens RepID=MURG_CLOP1
L3_072_123G1_scaffold_32_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12186..12365
DNA (180bp) protein (60aa)
Small, acid-soluble spore protein C1 n=11 Tax=Clostridium perfringens RepID=SAS1_CLOPE
sspC1; small, acid-soluble spore protein
Small, acid-soluble spore protein {ECO:0000313|EMBL:EDT15303.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_32_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12487..14265)
DNA (1779bp) protein (593aa)
Probable single-strand DNA-specific exonuclease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIQ0_CLOPE
recJ; single-stranded-DNA-specific exonuclease RecJ
Probable single-strand DNA-specific exonuclease {ECO:0000313|EMBL:BAB81771.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_32_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14277..15488)
DNA (1212bp) protein (404aa)
Peptidase, M16 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE71_CLOPF
Peptidase, M16 family {ECO:0000313|EMBL:EDT27713.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
M16 family peptidase
L3_072_123G1_scaffold_32_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15702..16277)
DNA (576bp) protein (192aa)
DJ-1 family protein n=2 Tax=Clostridium perfringens RepID=Q0TNP3_CLOP1
DJ-1 family protein
DJ-1 family protein {ECO:0000313|EMBL:EDT27821.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_072_123G1_scaffold_32_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16289..19228)
DNA (2940bp) protein (980aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
DNA topoisomerase IV subunit A n=2 Tax=Clostridium perfringens RepID=Q8XIP7_CLOPE
parC; DNA topoisomerase IV subunit A
L3_072_123G1_scaffold_32_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19242..21188)
DNA (1947bp) protein (649aa)
DNA topoisomerase IV subunit B n=7 Tax=Clostridium perfringens RepID=Q8XIP6_CLOPE
parE; DNA topoisomerase IV subunit B
DNA topoisomerase, GyrB/ParE subunit family {ECO:0000313|EMBL:EDT15276.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_32_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21178..22248)
DNA (1071bp) protein (357aa)
tRNA 2-selenouridine synthase {ECO:0000313|EMBL:ABG86574.1}; EC=2.9.1.- {ECO:0000313|EMBL:ABG86574.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
tRNA 2-selenouridine synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLL0_CLOPF
tRNA 2-selenouridine synthase
L3_072_123G1_scaffold_32_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22494..23894)
DNA (1401bp) protein (467aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDT25213.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT25213.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Glycosyl transferase, group 2 family protein n=6 Tax=Clostridium perfringens RepID=H7CY97_CLOPF
L3_072_123G1_scaffold_32_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24718..25956
DNA (1239bp) protein (413aa)
UV DNA damage endonuclease {ECO:0000255|HAMAP-Rule:MF_00606}; Short=UV-endonuclease {ECO:0000255|HAMAP-Rule:MF_00606};; Short=UVED {ECO:0000255|HAMAP-Rule:MF_00606};; EC=3.-.-.- {ECO:0000255|HAMAP-Rule:MF_00606};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
UV DNA damage endonuclease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=UVSE_CLOPE
UV damage endonuclease
L3_072_123G1_scaffold_32_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26041..26649
DNA (609bp) protein (203aa)
Putative sporulation protein YtaF n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE64_CLOPF
Putative sporulation protein YtaF {ECO:0000313|EMBL:EDT27657.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ytaF; sporulation protein YtaF
L3_072_123G1_scaffold_32_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26820..27989)
DNA (1170bp) protein (390aa)
Putative reductase HA1_12171 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Putative reductase HA1_12171 n=1 Tax=Clostridium perfringens F262 RepID=H7CYA0_CLOPF
trans-2-enoyl-CoA reductase
L3_072_123G1_scaffold_32_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28227..29717)
DNA (1491bp) protein (497aa)
Amino acid permease family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE62_CLOPF
Amino acid permease family protein {ECO:0000313|EMBL:EDT27673.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
amino acid permease
L3_072_123G1_scaffold_32_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29990..32230)
DNA (2241bp) protein (747aa)
Alpha-glucosidase {ECO:0000313|EMBL:EDT15319.1}; EC=3.2.1.20 {ECO:0000313|EMBL:EDT15319.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
alpha-glucosidase (EC:3.2.1.20)
Alpha-glucosidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSR7_CLOPF
L3_072_123G1_scaffold_32_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32283..33200)
DNA (918bp) protein (306aa)
ROK family protein n=2 Tax=Clostridium perfringens RepID=H7CYA3_CLOPF
ROK family protein {ECO:0000313|EMBL:EIA16281.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ROK family protein
L3_072_123G1_scaffold_32_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33316..34764)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XIN7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81784.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_32_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35148..35642
DNA (495bp) protein (165aa)
Putative membrane protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ25_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT73287.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_072_123G1_scaffold_32_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35710..38844)
DNA (3135bp) protein (1045aa)
Putative alpha-mannosidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ24_CLOPF
Putative alpha-mannosidase {ECO:0000313|EMBL:EDT73270.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
alpha-mannosidase
L3_072_123G1_scaffold_32_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39163..40119)
DNA (957bp) protein (319aa)
ABC transporter, permease protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR98_CLOPS
sugar transport system (permease) (binding protein dependent transporter)
ABC transporter, permease protein {ECO:0000313|EMBL:ABG85318.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_123G1_scaffold_32_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40138..41106)
DNA (969bp) protein (323aa)
ABC transporter, permease protein n=6 Tax=Clostridium perfringens RepID=H7CYA8_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDS80227.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter permease
L3_072_123G1_scaffold_32_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41335..41811)
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=5 Tax=Clostridium perfringens RepID=MOAC_CLOP1
moaC; molybdenum cofactor biosynthesis protein MoaC
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000255|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000255|HAMAP-Rule:MF_01224}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_32_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41848..42504)
DNA (657bp) protein (219aa)
Molybdate ABC transporter, permease protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSS5_CLOPF
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EDT15267.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
modB; molybdate ABC transporter permease
L3_072_123G1_scaffold_32_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42508..43278)
DNA (771bp) protein (257aa)
Molybdate ABC transporter, molybdate-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BID1_CLOPF
Molybdate ABC transporter, molybdate-binding protein {ECO:0000313|EMBL:EDS80173.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
modA; molybdate ABC transporter molybdate-binding protein
Displaying items 1-30 of 187 in total

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