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L3_072_123G1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_34_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(477..1199)
DNA (723bp) protein (241aa)
MgtC family protein n=2 Tax=Clostridium perfringens RepID=H7CT31_CLOPF
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:EIA18325.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_34_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1501..2424)
DNA (924bp) protein (308aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Glutaminase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIL1_CLOPF
glutaminase
L3_072_123G1_scaffold_34_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2940..3599)
DNA (660bp) protein (220aa)
Isochorismatase family protein n=3 Tax=Clostridium perfringens RepID=H7CT27_CLOPF
Isochorismatase family protein {ECO:0000313|EMBL:EIA18321.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
isochorismatase
L3_072_123G1_scaffold_34_4
unknown

Not on your lists

comp(3575..3685)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_072_123G1_scaffold_34_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3895..4956
DNA (1062bp) protein (354aa)
Permease n=5 Tax=Clostridium perfringens RepID=H7CT26_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT26186.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
permease
L3_072_123G1_scaffold_34_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5007..5459)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTL9_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70712.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_072_123G1_scaffold_34_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5943..6689
DNA (747bp) protein (249aa)
DeoR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CT24_CLOPF
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:EIA18318.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_34_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6689..7609
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Tagatose-6-phosphate kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V655_CLOPF
fruB; 1-phosphofructokinase
L3_072_123G1_scaffold_34_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7613..9505
DNA (1893bp) protein (631aa)
PTS system n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMV4_CLOPE
PTS system {ECO:0000313|EMBL:BAB80290.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
PTS system transporter
L3_072_123G1_scaffold_34_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9934..10932)
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=9 Tax=Clostridium perfringens RepID=H7CT21_CLOPF
phosphate transporter family protein
Phosphate transporter family protein {ECO:0000313|EMBL:EDT13909.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_34_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10925..11557)
DNA (633bp) protein (211aa)
Phosphate transport regulator n=10 Tax=Clostridium perfringens RepID=H7CT20_CLOPF
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:EIA18314.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_34_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11844..12431)
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CT19_CLOPF
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EIA18313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_34_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12588..13700)
DNA (1113bp) protein (371aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH33_CLOPF
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDS81064.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
iron-sulfur binding reductase
L3_072_123G1_scaffold_34_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13690..14385)
DNA (696bp) protein (232aa)
DedA family protein n=9 Tax=Clostridium perfringens RepID=H7CT17_CLOPF
DedA family protein
DedA family protein {ECO:0000313|EMBL:ABG87425.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_123G1_scaffold_34_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14733..15614)
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=8 Tax=Clostridium perfringens RepID=H7CT16_CLOPF
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIA18310.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_34_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15616..16542)
DNA (927bp) protein (309aa)
ABC transporter permease n=6 Tax=Clostridium perfringens RepID=H7CT15_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDT13923.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease
L3_072_123G1_scaffold_34_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16621..18006)
DNA (1386bp) protein (462aa)
ABC transporter n=4 Tax=Clostridium perfringens RepID=H7CT14_CLOPF
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS81063.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter
L3_072_123G1_scaffold_34_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18159..19748)
DNA (1590bp) protein (530aa)
DNA-binding response regulator, AraC family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V665_CLOPF
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT70697.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
AraC family transcriptional regulator
L3_072_123G1_scaffold_34_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19761..21512)
DNA (1752bp) protein (584aa)
Sensor histidine kinase n=2 Tax=Clostridium perfringens RepID=B1BH28_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EDS80880.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sensor histidine kinase
L3_072_123G1_scaffold_34_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21695..23932)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMW5_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB80279.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
L3_072_123G1_scaffold_34_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24192..24440)
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CT10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13925.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_34_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24599..24703)
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CT09_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18303.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_34_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24840..25247
DNA (408bp) protein (136aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CT08_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70518.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_072_123G1_scaffold_34_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25350..25811)
DNA (462bp) protein (154aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000255|HAMAP-Rule:MF_00178};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Clostridium perfringens RepID=RISB_CLOP1
L3_072_123G1_scaffold_34_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25938..27176)
DNA (1239bp) protein (413aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNJ4_CLOPF
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ribA; riboflavin biosynthesis protein RibA
L3_072_123G1_scaffold_34_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27290..27943)
DNA (654bp) protein (218aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABG85559.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ABG85559.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Riboflavin synthase, alpha subunit n=2 Tax=Clostridium perfringens RepID=Q0TTN9_CLOP1
L3_072_123G1_scaffold_34_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27962..29047)
DNA (1086bp) protein (362aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX2_CLOPE
ribB; riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_34_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29629..30297)
DNA (669bp) protein (223aa)
Putative N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium perfringens RepID=B1V6N9_CLOPF
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT70513.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
N-acetylmuramoyl-L-alanine amidase
L3_072_123G1_scaffold_34_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30676..32841
DNA (2166bp) protein (722aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6N8_CLOPF
Stage V sporulation protein D {ECO:0000313|EMBL:EDT70509.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
spoVD; stage V sporulation protein D
L3_072_123G1_scaffold_34_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33292..33999)
DNA (708bp) protein (236aa)
Trehalose operon repressor n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTQ6_CLOPF
trehalose operon transcriptional repressor
Trehalose operon transcriptional repressor {ECO:0000313|EMBL:ABG87829.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying items 1-30 of 176 in total

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