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L3_072_123G1_scaffold_89

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Displaying items 1-30 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_89_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..95
DNA (93bp) protein (31aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glutamate decarboxylase n=1 Tax=Escherichia coli ATCC 25922 RepID=R9EDW3_ECOLX
gadB; glutamate decarboxylase
L3_072_123G1_scaffold_89_2
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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463..1287
DNA (825bp) protein (275aa)
Transcriptional regulator GadX n=58 Tax=Escherichia RepID=Q0TBT8_ECOL5
DNA-binding transcriptional regulator GadX
Transcriptional regulator GadX {ECO:0000313|EMBL:CDC76207.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_072_123G1_scaffold_89_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1656..2384
DNA (729bp) protein (243aa)
HTH-type transcriptional regulator GadW n=346 Tax=Escherichia RepID=GADW_ECOL6
transcriptional regulator YhiW
HTH-type transcriptional regulator gadW {ECO:0000313|EMBL:EQP45259.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_89_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2529..2810
DNA (282bp) protein (94aa)
Uncharacterized protein n=437 Tax=Enterobacteriaceae RepID=E8YBZ2_ECOKO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN22919.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_072_123G1_scaffold_89_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2747..5860)
DNA (3114bp) protein (1038aa)
Multidrug resistance protein MdtF n=22 Tax=Escherichia coli RepID=B3HMS9_ECOLX
hypothetical protein
Multidrug resistance protein MdtF {ECO:0000313|EMBL:EZJ35906.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_072_123G1_scaffold_89_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5885..7042)
DNA (1158bp) protein (386aa)
Multidrug resistance protein MdtE n=363 Tax=Escherichia RepID=MDTE_ECOL6
yhiU; multidrug efflux system protein MdtE
Multidrug resistance protein mdtE {ECO:0000313|EMBL:EHU18780.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_072_123G1_scaffold_89_7
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7102..7431
DNA (330bp) protein (110aa)
Uncharacterized protein n=218 Tax=Escherichia RepID=D7Z0Y0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDC76202.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
hypothetical protein
L3_072_123G1_scaffold_89_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7381..7908)
DNA (528bp) protein (176aa)
Transcriptional regulator GadE n=1330 Tax=Enterobacteriaceae RepID=GADE_ECO57
putative DNA-binding transcriptional activator
Transcriptional regulator GadE {ECO:0000313|EMBL:EGI08738.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L3_072_123G1_scaffold_89_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8708..9280)
DNA (573bp) protein (191aa)
Protein hdeD n=420 Tax=Escherichia RepID=E2QGL8_ECOLX
hdeD; acid-resistance membrane protein
Protein hdeD {ECO:0000313|EMBL:EQY81001.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_072_123G1_scaffold_89_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9535..9867
DNA (333bp) protein (111aa)
Acid stress chaperone HdeA n=417 Tax=Escherichia RepID=D3Y2Z3_ECOLX
hdeA; acid-resistance protein
Acid stress chaperone HdeA {ECO:0000256|HAMAP-Rule:MF_00946}; Flags: Precursor;; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_072_123G1_scaffold_89_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9971..10309
DNA (339bp) protein (113aa)
Acid stress chaperone HdeB n=21 Tax=Escherichia coli RepID=B1LJ51_ECOSM
acid-resistance protein
Acid stress chaperone HdeB {ECO:0000256|HAMAP-Rule:MF_00947}; Flags: Precursor;; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_072_123G1_scaffold_89_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10445..11020
DNA (576bp) protein (192aa)
Uncharacterized protein yhiD n=8 Tax=Escherichia coli RepID=E2QGL5_ECOLX
yhiD; Mg(2+) transport ATPase
Putative transport ATPase {ECO:0000313|EMBL:EGI48745.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_072_123G1_scaffold_89_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11072..11842)
DNA (771bp) protein (257aa)
hmuV; hemin ABC transporter, ATP-binding protein (EC:3.6.3.-)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Hemin import ATP-binding protein HmuV n=285 Tax=Escherichia coli RepID=HMUV_ECOL5
L3_072_123G1_scaffold_89_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11839..12795)
DNA (957bp) protein (319aa)
Permease of iron compound ABC transport system n=413 Tax=Escherichia RepID=E2QGL3_ECOLX
hemin ABC transporter permease component
Uncharacterized protein {ECO:0000313|EMBL:EOV61716.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L3_072_123G1_scaffold_89_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12880..13503)
DNA (624bp) protein (208aa)
Uncharacterized protein n=86 Tax=Escherichia coli RepID=B3HMT9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD46438.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_072_123G1_scaffold_89_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13503..13997)
DNA (495bp) protein (165aa)
Uncharacterized protein n=370 Tax=Escherichia RepID=B7MEK6_ECO45
chuX; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELE52299.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_072_123G1_scaffold_89_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14010..15347)
DNA (1338bp) protein (446aa)
Oxygen independent coproporphyrinogen III oxidase n=158 Tax=Escherichia coli RepID=E2QGL0_ECOLX
putative coproporphyrinogen III oxidase
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:EQX25144.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_072_123G1_scaffold_89_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15367..16281)
DNA (915bp) protein (305aa)
Hemin-binding periplasmic protein hmuT n=173 Tax=Escherichia RepID=T2MXH9_ECOLX
chuT; periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:EOU87498.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_072_123G1_scaffold_89_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16965..18947
DNA (1983bp) protein (661aa)
Outer membrane hemin receptor ChuA n=26 Tax=Escherichia coli RepID=Q9EZQ6_ECOLX
Outer membrane hemin receptor ChuA {ECO:0000313|EMBL:AAG44838.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
outer membrane hemin receptor
L3_072_123G1_scaffold_89_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18996..20024
DNA (1029bp) protein (343aa)
Heme oxygenase n=159 Tax=Escherichia RepID=B7MEK2_ECO45
chuS; heme/hemoglobin transport protein ChuS
Putative heme/hemoglobin transport protein {ECO:0000313|EMBL:EHU38058.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_072_123G1_scaffold_89_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20081..20611)
DNA (531bp) protein (177aa)
HTH-type transcriptional regulator DctR n=339 Tax=Escherichia RepID=DCTR_ECOL6
LuxR family transcriptional regulator
DNA-binding transcriptional regulator {ECO:0000313|EMBL:EHU38057.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_072_123G1_scaffold_89_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20764..21330)
DNA (567bp) protein (189aa)
Outer membrane protein slp n=1 Tax=Escherichia coli UMEA 3052-1 RepID=T8M3Y3_ECOLX
slp; outer membrane lipoprotein
Outer membrane protein slp {ECO:0000313|EMBL:EMX82470.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L3_072_123G1_scaffold_89_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21724..21897)
DNA (174bp) protein (58aa)
Uncharacterized protein n=207 Tax=Escherichia RepID=E1PJ02_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP45237.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_89_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22514..22939)
DNA (426bp) protein (142aa)
arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Arsenate reductase n=24 Tax=Escherichia coli RepID=Q0TBW1_ECOL5
L3_072_123G1_scaffold_89_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23272..23445)
DNA (174bp) protein (58aa)
Uncharacterized protein n=194 Tax=Escherichia RepID=B7MEJ7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ73425.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_072_123G1_scaffold_89_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23610..24962)
DNA (1353bp) protein (451aa)
gor; glutathione-disulfide reductase (EC:1.8.1.7)
Glutathione oxidoreductase n=103 Tax=Escherichia RepID=B7MEJ5_ECO45
Glutathione reductase {ECO:0000313|EMBL:EQX25135.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_072_123G1_scaffold_89_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25034..25876)
DNA (843bp) protein (281aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Ribosomal RNA large subunit methyltransferase J n=799 Tax=Enterobacteriaceae RepID=J7QIA1_ECOLX
putative DNA processing protein
L3_072_123G1_scaffold_89_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26079..28121
DNA (2043bp) protein (681aa)
oligopeptidase A (EC:3.4.24.70)
Oligopeptidase A {ECO:0000313|EMBL:EHU50995.1}; EC=3.4.24.70 {ECO:0000313|EMBL:EHU50995.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Oligopeptidase A n=25 Tax=Escherichia coli RepID=Q0TBW5_ECOL5
L3_072_123G1_scaffold_89_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28087..28881
DNA (795bp) protein (265aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Ribosomal RNA small subunit methyltransferase J n=112 Tax=Escherichia coli RepID=G7RFN9_ECOC2
yhiQ; putative methyltransferase
L3_072_123G1_scaffold_89_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28930..30399)
DNA (1470bp) protein (490aa)
Dipeptide and tripeptide permease B n=337 Tax=Escherichia RepID=C3SNY2_ECOLX
yhiP; hypothetical protein
Dipeptide and tripeptide permease B {ECO:0000256|HAMAP-Rule:MF_01879}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Displaying items 1-30 of 187 in total

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