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L3_072_123G1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_91_1
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1974)
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Corynebacterium capitovis RepID=UPI000372D91D
DNA-directed DNA polymerase
DNA-directed DNA polymerase {ECO:0000313|EMBL:AFV88890.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
L3_072_123G1_scaffold_91_2
unknown

Not on your lists

comp(1971..2234)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_072_123G1_scaffold_91_3
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2557..3777
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000360A9A1
Uncharacterized protein {ECO:0000313|EMBL:EJZ85052.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
phage integrase family protein
L3_072_123G1_scaffold_91_4
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4149..5636
DNA (1488bp) protein (496aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WW67_9ACTO
Peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:EPH02086.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ABC transporter substrate-binding protein
L3_072_123G1_scaffold_91_5
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5633..6610
DNA (978bp) protein (326aa)
Peptide/nickel transport system permease n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3Y127_9ACTO
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPH02085.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ABC transporter, permease protein
L3_072_123G1_scaffold_91_6
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6607..7419
DNA (813bp) protein (271aa)
Peptide/nickel transport system permease n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WTR8_9ACTO
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPH02084.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ABC transporter, permease protein
L3_072_123G1_scaffold_91_7
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7419..8231
DNA (813bp) protein (271aa)
Microcin C transport system ATP-binding protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9P0_9ACTO
Microcin C transport system ATP-binding protein {ECO:0000313|EMBL:EPH02083.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ABC transporter ATP-binding protein
L3_072_123G1_scaffold_91_8
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8228..9013
DNA (786bp) protein (262aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WYE4_9ACTO
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPH02082.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ABC transporter, ATP-binding protein
L3_072_123G1_scaffold_91_9
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9060..10250
DNA (1191bp) protein (397aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WW65_9ACTO
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EPH02081.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
D-3-phosphoglycerate dehydrogenase
L3_072_123G1_scaffold_91_10
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10333..11121)
DNA (789bp) protein (263aa)
Histidinol-phosphatase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3Y123_9ACTO
Histidinol-phosphatase {ECO:0000313|EMBL:EPH02080.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
putative inositol monophosphatase
L3_072_123G1_scaffold_91_11
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11204..12721
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WTR5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH02079.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
L3_072_123G1_scaffold_91_12
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12743..13744)
DNA (1002bp) protein (334aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9N7_9ACTO
putative GTPase
L3_072_123G1_scaffold_91_13
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13745..15034)
DNA (1290bp) protein (430aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WYD9_9ACTO
L3_072_123G1_scaffold_91_14
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15024..15587)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WW58_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH02076.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
L3_072_123G1_scaffold_91_15
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15814..16524
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3Y122_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
RNA polymerase sigma factor RpoE
L3_072_123G1_scaffold_91_16
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16521..16790
DNA (270bp) protein (90aa)
Anti-sigma factor n=8 Tax=Propionibacterium RepID=M9VH22_9ACTO
anti-sigma factor
TIGR02949 family anti-sigma factor {ECO:0000313|EMBL:ERS65896.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1852.;"
L3_072_123G1_scaffold_91_17
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17007..18515)
DNA (1509bp) protein (503aa)
PHP domain-containing protein n=1 Tax=Propionibacterium avidum 44067 RepID=M9VD33_9ACTO
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:EGY76731.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
L3_072_123G1_scaffold_91_18
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18649..19113)
DNA (465bp) protein (155aa)
PHP domain-containing protein n=1 Tax=Propionibacterium avidum 44067 RepID=M9VD33_9ACTO
PHP domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ERS65893.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1852.;"
L3_072_123G1_scaffold_91_19
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19715..21190
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9N3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH02073.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
L3_072_123G1_scaffold_91_20
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21260..21511)
DNA (252bp) protein (84aa)
Transcriptional regulator WhiB n=99 Tax=Propionibacterium RepID=Q6A8A4_PROAC
whiB1; putative transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1271528 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes HL201PA1.;"
L3_072_123G1_scaffold_91_21
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21790..22188
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WW53_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH02071.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
L3_072_123G1_scaffold_91_22
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22237..22437)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3Y118_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH02070.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
L3_072_123G1_scaffold_91_23
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22490..26287)
DNA (3798bp) protein (1266aa)
kgd; alpha-ketoglutarate decarboxylase (EC:4.1.1.71)
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WTQ7_9ACTO
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component {ECO:0000313|EMBL:EPH02069.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
L3_072_123G1_scaffold_91_24
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26477..27850)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9M9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH02068.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
L3_072_123G1_scaffold_91_25
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28052..29488
DNA (1437bp) protein (479aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Diaminopimelate decarboxylase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WYD1_9ACTO
diaminopimelate decarboxylase
L3_072_123G1_scaffold_91_26
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29559..30884
DNA (1326bp) protein (442aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WW51_9ACTO
L3_072_123G1_scaffold_91_27
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30887..31957
DNA (1071bp) protein (357aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Threonine synthase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3Y116_9ACTO
threonine synthase
L3_072_123G1_scaffold_91_28
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31968..32858
DNA (891bp) protein (297aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Homoserine kinase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WTQ3_9ACTO
homoserine kinase
L3_072_123G1_scaffold_91_29
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33159..35060
DNA (1902bp) protein (634aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Transcription termination factor Rho n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X9M7_9ACTO
transcription termination factor Rho
L3_072_123G1_scaffold_91_30
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


35175..35384
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=8 Tax=Propionibacterium RepID=M9VAP0_9ACTO
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Displaying items 1-30 of 114 in total

View Taxonomy