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L3_072_123G1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_146_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111..512
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENI2_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52260.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_123G1_scaffold_146_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

673..939
DNA (267bp) protein (89aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4VCG6_BIFBI
transposase
Putative transposase {ECO:0000313|EMBL:ADO52259.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_123G1_scaffold_146_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1145..2593)
DNA (1449bp) protein (483aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCG5_BIFBI
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EFR51280.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
L3_072_123G1_scaffold_146_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2707..4047)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VCG4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52257.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_123G1_scaffold_146_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4391..5413)
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
dTDP-glucose 4,6-dehydratase n=3 Tax=Bifidobacterium bifidum RepID=E3ENH8_BIFBS
rmlB2; dTDP-glucose 4,6-dehydratase
L3_072_123G1_scaffold_146_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5521..7710)
DNA (2190bp) protein (730aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI00019770ED
Uncharacterized protein {ECO:0000313|EMBL:EFR51277.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_072_123G1_scaffold_146_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8078..9028
DNA (951bp) protein (317aa)
Glycosyl transferase, family 2 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH6_BIFBS
family 2 glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ADO52254.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_123G1_scaffold_146_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9101..11704)
DNA (2604bp) protein (868aa)
1,4-beta-N-acetylmuramidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH5_BIFBS
1,4-beta-N-acetylmuramidase {ECO:0000313|EMBL:ADO52253.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
lytC; 1,4-beta-N-acetylmuramidase
L3_072_123G1_scaffold_146_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11820..12035
DNA (216bp) protein (72aa)
Acyltransferase 3 n=2 Tax=Bifidobacterium RepID=E3ENH4_BIFBS
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:CDB22824.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_123G1_scaffold_146_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12047..13084)
DNA (1038bp) protein (346aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HRF1_BIFBI
rmlB1; dTDP-glucose 4,6-dehydratase
L3_072_123G1_scaffold_146_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13316..13864)
DNA (549bp) protein (183aa)
Putative ATP-binding region, ATPase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFI1_BIFBI
putative ATP-binding region, ATPase
Putative ATP-binding region, ATPase {ECO:0000313|EMBL:AFL03644.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_123G1_scaffold_146_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13946..14458)
DNA (513bp) protein (171aa)
Two-component response regulator n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M5E5_BIFBI
Two-component response regulator {ECO:0000313|EMBL:EKF16270.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
two-component response regulator
L3_072_123G1_scaffold_146_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14706..15086)
DNA (381bp) protein (127aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WFH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52248.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_123G1_scaffold_146_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15227..16324
DNA (1098bp) protein (366aa)
trpS; TrpS Tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EFR51268.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EFR51268.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
TrpS Tryptophanyl-tRNA synthetase n=3 Tax=Bifidobacterium bifidum RepID=E4NY13_BIFBP
L3_072_123G1_scaffold_146_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16800..17819)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GN05_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23039.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L3_072_123G1_scaffold_146_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18374..18553
DNA (180bp) protein (60aa)
Putative metal-dependent hydrolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFH6_BIFBI
putative metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AFL03639.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_123G1_scaffold_146_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18674..19483
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI0003183F80
Amidohydrolase family protein {ECO:0000313|EMBL:EFR51266.1}; Flags: Fragment;; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
amidohydrolase
L3_072_123G1_scaffold_146_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19556..21538)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CJL2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI84233.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_123G1_scaffold_146_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21970..23502
DNA (1533bp) protein (511aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Phosphoenolpyruvate carboxylase n=2 Tax=Bifidobacterium bifidum RepID=E3ENG5_BIFBS
phosphoenolpyruvate carboxylase
L3_072_123G1_scaffold_146_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23487..24572
DNA (1086bp) protein (362aa)
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Phosphoenolpyruvate carboxylase n=3 Tax=Bifidobacterium bifidum RepID=K2I691_BIFBI
L3_072_123G1_scaffold_146_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25072..26358
DNA (1287bp) protein (429aa)
Permease MFS superfamily n=3 Tax=Bifidobacterium RepID=E4NY08_BIFBP
Permease MFS superfamily
Inner membrane protein {ECO:0000313|EMBL:AFL03635.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_123G1_scaffold_146_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26644..28290)
DNA (1647bp) protein (549aa)
Divergent AAA domain protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCE6_BIFBI
Divergent AAA domain protein {ECO:0000313|EMBL:EFR51261.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
recG; ATP-dependent DNA helicase
L3_072_123G1_scaffold_146_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28399..30312)
DNA (1914bp) protein (638aa)
Thioredoxin reductase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H8L2_BIFBI
Thioredoxin reductase {ECO:0000313|EMBL:EKE50331.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
trxB1; Thioredoxin reductase/Thioredoxin/glutaredoxin family protein
L3_072_123G1_scaffold_146_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30655..31218)
DNA (564bp) protein (188aa)
ahpC; peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:EFR51259.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFR51259.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Alkyl hydroperoxide reductase C22 protein n=8 Tax=Bifidobacterium RepID=E3ENG1_BIFBS
L3_072_123G1_scaffold_146_25
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31435..32184
DNA (750bp) protein (250aa)
cynT; carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Carbonic anhydrase n=6 Tax=Bifidobacterium RepID=I3WFG8_BIFBI
L3_072_123G1_scaffold_146_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32301..32876
DNA (576bp) protein (192aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CI86_BIFBI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERI84240.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
putative HTH-type transcriptional regulator
L3_072_123G1_scaffold_146_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33085..34407
DNA (1323bp) protein (441aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VCE1_BIFBI
putative transport protein
Conserved hypothetical membrane spanning protein with DUF21 and CBS domains {ECO:0000313|EMBL:ADO52236.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_123G1_scaffold_146_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34443..35516)
DNA (1074bp) protein (358aa)
Inner membrane protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFG5_BIFBI
yddG; inner membrane protein
Inner membrane protein {ECO:0000313|EMBL:AFL03628.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_123G1_scaffold_146_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35958..36437
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage, Dps family protein n=7 Tax=Bifidobacterium RepID=E3ENF6_BIFBS
dps; DNA protection during starvation protein
Ferritin-like protein {ECO:0000313|EMBL:EFR51254.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_123G1_scaffold_146_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36625..37374)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VCD8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR51253.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
Displaying items 1-30 of 75 in total

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