ggKbase home page

L3_072_123G1_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_150_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

494..1963
DNA (1470bp) protein (490aa)
Amino acid permease family protein n=4 Tax=Clostridium perfringens RepID=H7CUS0_CLOPF
Amino acid permease family protein {ECO:0000313|EMBL:EIA17504.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
amino acid permease
L3_072_123G1_scaffold_150_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2252..2926
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XLV2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80644.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_150_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3273..3785
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RH49_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT26740.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
GNAT family acetyltransferase
L3_072_123G1_scaffold_150_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3873..4232)
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CUS5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17509.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_072_123G1_scaffold_150_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4279..4608)
DNA (330bp) protein (110aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CUS6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17510.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_150_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4791..5780
DNA (990bp) protein (330aa)
Putative lysophospholipase n=2 Tax=Clostridium perfringens RepID=Q0TRV6_CLOP1
lysophospholipase
Putative lysophospholipase {ECO:0000313|EMBL:EDT24484.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_072_123G1_scaffold_150_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5837..6493)
DNA (657bp) protein (219aa)
Pentapeptide repeat protein n=3 Tax=Clostridium perfringens RepID=Q0TRV5_CLOP1
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:EDT14365.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_150_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6749..7630)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHG4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80776.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_072_123G1_scaffold_150_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8039..10276
DNA (2238bp) protein (746aa)
EAL domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHG3_CLOPF
EAL domain protein {ECO:0000313|EMBL:EDS80759.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
diguanylate phosphodiesterase
L3_072_123G1_scaffold_150_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10737..12044
DNA (1308bp) protein (436aa)
Sodium:dicarboxylate symporter family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHG2_CLOPF
Sodium:dicarboxylate symporter family {ECO:0000313|EMBL:EDS80760.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sodium:dicarboxylate symporter family protein
L3_072_123G1_scaffold_150_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12387..13076
DNA (690bp) protein (230aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V858_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT70003.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
DNA-binding response regulator
L3_072_123G1_scaffold_150_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13286..14206
DNA (921bp) protein (307aa)
Bacitracin ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVB6_CLOPF
Bacitracin ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT14380.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter
L3_072_123G1_scaffold_150_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14199..14951
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLU0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80656.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_150_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14965..15870
DNA (906bp) protein (302aa)
Sensor histidine kinase {ECO:0000313|EMBL:EDT26777.1}; EC=2.7.3.- {ECO:0000313|EMBL:EDT26777.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RH37_CLOPF
sensor histidine kinase
L3_072_123G1_scaffold_150_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15975..16202)
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CUT5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17519.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_150_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16502..17713
DNA (1212bp) protein (404aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=3 Tax=Clostridium perfringens RepID=Q0TRU7_CLOP1
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:EDT26778.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_072_123G1_scaffold_150_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17931..18467
DNA (537bp) protein (179aa)
Glutathione peroxidase n=8 Tax=Clostridium perfringens RepID=H7CUT9_CLOPF
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_150_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18678..19343
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=H7CUU0_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIA17524.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ABC transporter ATP-binding protein
L3_072_123G1_scaffold_150_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19399..20316
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQ16_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17525.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_072_123G1_scaffold_150_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20327..21622
DNA (1296bp) protein (432aa)
Putative permease n=2 Tax=Clostridium perfringens RepID=H7CUU2_CLOPF
Putative permease {ECO:0000313|EMBL:EIA17526.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
permease
L3_072_123G1_scaffold_150_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21718..22875)
DNA (1158bp) protein (386aa)
Triple helix repeat-containing collagen n=2 Tax=Clostridium perfringens RepID=H7CUU3_CLOPF
Triple helix repeat-containing collagen {ECO:0000313|EMBL:EIA17527.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
triple helix repeat-containing collagen
L3_072_123G1_scaffold_150_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22977..23567)
DNA (591bp) protein (197aa)
Putative metal-dependent hydrolase, membrane-bound n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RH27_CLOPF
Putative metal-dependent hydrolase, membrane-bound {ECO:0000313|EMBL:EDT26729.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
metal-dependent hydrolase, membrane-bound
L3_072_123G1_scaffold_150_23
unknown

Not on your lists

23700..23864
DNA (165bp) protein (55aa)

This feature has no annotations

L3_072_123G1_scaffold_150_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24185..24799
DNA (615bp) protein (205aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN98_CLOPF
NUDIX family hydrolase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDT24555.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_072_123G1_scaffold_150_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24894..25049)
DNA (156bp) protein (52aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CUU7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80665.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_150_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25178..25819
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CUU8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17532.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_072_123G1_scaffold_150_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26026..26457
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=3 Tax=Clostridium perfringens RepID=Q0TRT6_CLOP1
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT26776.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_072_123G1_scaffold_150_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26810..28546
DNA (1737bp) protein (579aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RH21_CLOPF
L3_072_123G1_scaffold_150_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28560..30626
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVA2_CLOPF
L3_072_123G1_scaffold_150_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30641..31237
DNA (597bp) protein (199aa)
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Potassium-transporting ATPase C chain n=2 Tax=Clostridium perfringens RepID=ATKC_CLOP1
Displaying items 1-30 of 66 in total

View Taxonomy