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L3_072_123G1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_255_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48..443)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7F1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETJ02099.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
membrane protein
L3_072_123G1_scaffold_255_2
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(600..1838)
DNA (1239bp) protein (413aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
ImpB/MucB/SamB family protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7F0_9ACTO
L3_072_123G1_scaffold_255_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1861..2682
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH65358.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_123G1_scaffold_255_4
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2708..3961)
DNA (1254bp) protein (418aa)
UPI0003D611D6 related cluster n=1 Tax=unknown RepID=UPI0003D611D6
Uncharacterized protein {ECO:0000313|EMBL:KGE98978.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
putative glucarate transporter
L3_072_123G1_scaffold_255_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4001..4951)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E7_9ACTO
Proteasome protein {ECO:0000313|EMBL:KGE98977.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_123G1_scaffold_255_6
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5057..7588
DNA (2532bp) protein (844aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E6_9ACTO
UvrD/REP helicase
L3_072_123G1_scaffold_255_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7708..9561
DNA (1854bp) protein (618aa)
AMP-binding enzyme n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E5_9ACTO
AMP-binding enzyme {ECO:0000313|EMBL:EEH65354.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
amp-dependent synthetase and ligase
L3_072_123G1_scaffold_255_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9558..11354
DNA (1797bp) protein (599aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGE98974.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KGE98974.1};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
AMP-binding enzyme n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E4_9ACTO
amp-dependent synthetase and ligase
L3_072_123G1_scaffold_255_9
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11368..12264)
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E3_9ACTO
dihydrodipicolinate synthase
L3_072_123G1_scaffold_255_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12348..13013
DNA (666bp) protein (222aa)
Acetyltransferase, GNAT family n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E2_9ACTO
GNAT family acetyltransferase {ECO:0000313|EMBL:KGE98972.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
GCN5-like N-acetyltransferase
L3_072_123G1_scaffold_255_11
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13017..13769)
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E1_9ACTO
L3_072_123G1_scaffold_255_12
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13796..15160)
DNA (1365bp) protein (455aa)
processing peptidase (EC:3.4.24.64)
Peptidase, M16 family n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7E0_9ACTO
Zinc protease {ECO:0000313|EMBL:KGE98970.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
L3_072_123G1_scaffold_255_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15265..17634)
DNA (2370bp) protein (790aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7D9_9ACTO
L3_072_123G1_scaffold_255_14
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17906..18175)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7D8_9ACTO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
30S ribosomal protein S15
L3_072_123G1_scaffold_255_15
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18327..19457)
DNA (1131bp) protein (377aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
Riboflavin kinase (Fragment) n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7D7_9ACTO
riboflavin biosynthesis protein RibF
L3_072_123G1_scaffold_255_16
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19402..19671)
DNA (270bp) protein (90aa)
UPI0003D690C9 related cluster n=1 Tax=unknown RepID=UPI0003D690C9
Uncharacterized protein {ECO:0000313|EMBL:ETJ04694.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_123G1_scaffold_255_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19700..20734)
DNA (1035bp) protein (345aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D62225 related cluster n=1 Tax=unknown RepID=UPI0003D62225
tRNA pseudouridine synthase B
L3_072_123G1_scaffold_255_18
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20731..21204)
DNA (474bp) protein (158aa)
Ribosome-binding factor A n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7D4_9ACTO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
Ribosome-binding factor A
L3_072_123G1_scaffold_255_19
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21490..22251
DNA (762bp) protein (254aa)
UPI0003D615E9 related cluster n=1 Tax=unknown RepID=UPI0003D615E9
Putative cytochrome B561 {ECO:0000313|EMBL:ETJ06419.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
oxidoreductase
L3_072_123G1_scaffold_255_20
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22494..22985
DNA (492bp) protein (164aa)
UPI0003D64A0D related cluster n=1 Tax=unknown RepID=UPI0003D64A0D
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ETJ05743.1}; Flags: Fragment;; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
oxidoreductase
L3_072_123G1_scaffold_255_21
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22982..23524)
DNA (543bp) protein (181aa)
UPI0003D631B7 related cluster n=1 Tax=unknown RepID=UPI0003D631B7
DMT superfamily drug/metabolite transporter {ECO:0000313|EMBL:ETJ05744.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L3_072_123G1_scaffold_255_22
unknown

Not on your lists

23659..23769
DNA (111bp) protein (37aa)

This feature has no annotations

L3_072_123G1_scaffold_255_23
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23993..25759)
DNA (1767bp) protein (589aa)
Translation initiation factor IF-2 (Fragment) n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7D0_9ACTO
Translation initiation factor IF-2 {ECO:0000256|RuleBase:RU000644}; Flags: Fragment;; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
translation initiation factor IF-2
L3_072_123G1_scaffold_255_24
unknown

Not on your lists

comp(26092..26265)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_072_123G1_scaffold_255_25
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26418..26618
DNA (201bp) protein (67aa)
UPI0003D637BA related cluster n=1 Tax=unknown RepID=UPI0003D637BA
Uncharacterized protein {ECO:0000313|EMBL:ETJ04771.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_123G1_scaffold_255_26
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27525..28571)
DNA (1047bp) protein (349aa)
Transcription termination factor NusA n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7C7_9ACTO
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
NusA antitermination factor
L3_072_123G1_scaffold_255_27
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28599..29063)
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7C6_9ACTO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_123G1_scaffold_255_28
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29175..30152
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7C5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGE98960.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
Cardiolipin synthetase
L3_072_123G1_scaffold_255_29
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30140..33055)
DNA (2916bp) protein (972aa)
UPI0003D60A35 related cluster n=1 Tax=unknown RepID=UPI0003D60A35
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGE98959.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
DNA or RNA helicase of superfamily II
L3_072_123G1_scaffold_255_30
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(33088..34932)
DNA (1845bp) protein (615aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Proline--tRNA ligase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W7C3_9ACTO
prolyl-tRNA synthetase
Displaying items 1-30 of 41 in total

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