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L3_072_123G1_scaffold_290

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_290_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(240..962)
DNA (723bp) protein (241aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVT5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17160.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_290_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1144..1482)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XKY9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27604.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_072_123G1_scaffold_290_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1506..2945)
DNA (1440bp) protein (480aa)
gltA; oxidoreductase (EC:1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=5 Tax=Clostridium perfringens RepID=Q0TR34_CLOP1
Glutamate synthase beta subunit {ECO:0000313|EMBL:BAB80960.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_290_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2905..3804)
DNA (900bp) protein (300aa)
ferredoxin-NADP reductase (EC:1.18.1.2)
Ferredoxin-NADP(+) reductase subunit alpha {ECO:0000313|EMBL:EIA17163.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EIA17163.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQT9_CLOPF
L3_072_123G1_scaffold_290_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3955..5121)
DNA (1167bp) protein (389aa)
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EDT24389.1}; EC=1.1.1.- {ECO:0000313|EMBL:EDT24389.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
adh1; NADPH-dependent butanol dehydrogenase (EC:1.1.1.-)
NADPH-dependent butanol dehydrogenase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5Z0_CLOPF
L3_072_123G1_scaffold_290_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5235..6722)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVU0_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDS80016.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_072_123G1_scaffold_290_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7283..10165
DNA (2883bp) protein (961aa)
Putative enterotoxin n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJM8_CLOPF
Putative enterotoxin {ECO:0000313|EMBL:EDS80014.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
entA; enterotoxin
L3_072_123G1_scaffold_290_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10488..11474)
DNA (987bp) protein (329aa)
Putative type II restriction enzyme HphI n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5Y5_CLOPF
Putative type II restriction enzyme HphI {ECO:0000313|EMBL:EDT24366.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_072_123G1_scaffold_290_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11784..12404)
DNA (621bp) protein (207aa)
Conserved domain protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5Y4_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT24451.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_072_123G1_scaffold_290_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13482..13946
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=10 Tax=Clostridium perfringens RepID=H7CVU5_CLOPF
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_123G1_scaffold_290_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14250..19016)
DNA (4767bp) protein (1589aa)
Sialidase-like protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKX8_CLOPE
Sialidase-like protein {ECO:0000313|EMBL:BAB80970.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
sialidase-like protein
L3_072_123G1_scaffold_290_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19276..21021
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVU7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17172.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_072_123G1_scaffold_290_13
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21213..21926)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DYA9_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KGJ48201.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_072_123G1_scaffold_290_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22149..26225)
DNA (4077bp) protein (1359aa)
Beta-galactosidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKX6_CLOPE
beta-galactosidase
Beta-galactosidase {ECO:0000313|EMBL:BAB80972.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_290_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26475..27875)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKX5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80973.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_290_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27958..29664)
DNA (1707bp) protein (569aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Adenine deaminase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRM6_CLOPF
adenine deaminase
L3_072_123G1_scaffold_290_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29680..30726)
DNA (1047bp) protein (349aa)
Probable spermidine/putrescine-binding protein 1 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKX3_CLOPE
spermidine/putrescine-binding protein 1
Probable spermidine/putrescine-binding protein 1 {ECO:0000313|EMBL:BAB80975.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_290_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30766..31797)
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR19_CLOP1
ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB80976.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_290_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31833..32615)
DNA (783bp) protein (261aa)
ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=Q0TR18_CLOP1
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EDT27558.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_072_123G1_scaffold_290_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32617..33447)
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR17_CLOP1
ABC transporter, permease protein {ECO:0000313|EMBL:EDT27641.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter permease
L3_072_123G1_scaffold_290_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33835..34983)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR16_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15676.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_072_123G1_scaffold_290_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35180..36145)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQF6_CLOPF
dihydrouridine synthase
L3_072_123G1_scaffold_290_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36249..37619)
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REJ6_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EDT24355.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_072_123G1_scaffold_290_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37993..38334)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STG0_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86630.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_072_123G1_scaffold_290_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38346..40262)
DNA (1917bp) protein (639aa)
Oligopeptide transporter, OPT family n=3 Tax=Clostridium perfringens RepID=Q0TR12_CLOP1
OPT family oligopeptide transporter
Uncharacterized protein {ECO:0000313|EMBL:BAB80984.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_072_123G1_scaffold_290_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40934..41989)
DNA (1056bp) protein (352aa)
Putative hyaluronoglucosaminidase n=1 Tax=Clostridium perfringens F262 RepID=H7CVV4_CLOPF
Putative hyaluronoglucosaminidase {ECO:0000313|EMBL:EIA17179.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hyaluronoglucosaminidase
Displaying 26 items

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