name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_072_123G1_scaffold_299_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
460..2766
|
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DN85_BIFBI
|
|
L3_072_123G1_scaffold_299_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
2909..3757
|
metF; methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Methylenetetrahydrofolate reductase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1P3_BIFBP
|
|
L3_072_123G1_scaffold_299_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3874..4206)
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM89_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53096.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_072_123G1_scaffold_299_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4288..7386
|
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM90_BIFBS
glnE; glutamate-ammonia-ligase adenylyltransferase
|
|
L3_072_123G1_scaffold_299_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7494..8489
|
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Aspartate carbamoyltransferase n=2 Tax=Bifidobacterium bifidum RepID=U2DTD5_BIFBI
pyrB; aspartate carbamoyltransferase
|
|
L3_072_123G1_scaffold_299_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8489..8908
|
Aspartate carbamoyltransferase regulatory subunit 1 n=8 Tax=Bifidobacterium RepID=E3EM92_BIFBS
pyrI; aspartate carbamoyl transferase regulatory subunit
Aspartate carbamoyltransferase regulatory subunit 1 {ECO:0000313|EMBL:CDB22908.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_072_123G1_scaffold_299_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9017..10441
|
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Dihydroorotase n=3 Tax=Bifidobacterium bifidum RepID=E4V9N4_BIFBI
pyrC; dihydroorotase
|
|
L3_072_123G1_scaffold_299_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10512..11477
|
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Orotidine 5'-phosphate decarboxylase n=5 Tax=Bifidobacterium RepID=E4V9N5_BIFBI
pyrF1; Orotidine 5'-phosphate decarboxylase
|
|
L3_072_123G1_scaffold_299_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11610..12440
|
Dihydroorotate dehydrogenase electron transfer subunit n=7 Tax=Bifidobacterium RepID=I3WHV6_BIFBI
pyrK; dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:CCY94938.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
|
|
L3_072_123G1_scaffold_299_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12443..13390
|
pyrD; dihydroorotate dehydrogenase, catalytic subunit pyrD (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Dihydroorotate dehydrogenase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NWU4_BIFBP
|
|
L3_072_123G1_scaffold_299_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13412..14110
|
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Orotate phosphoribosyltransferase n=2 Tax=Bifidobacterium bifidum RepID=E4NWU5_BIFBP
|
|
L3_072_123G1_scaffold_299_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14261..14389
|
Transcriptional regulator, MerR family n=4 Tax=Bifidobacterium bifidum RepID=E4NWU6_BIFBP
MerR family transcriptional regulator
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:ADO53105.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_072_123G1_scaffold_299_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14386..15384
|
Adh Alcohol dehydrogenase {ECO:0000313|EMBL:KFI43000.1}; EC=1.1.1.284 {ECO:0000313|EMBL:KFI43000.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
adh; alcohol dehydrogenase (EC:1.1.1.284)
GroES-like protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BXU3_BIFBI
|
|
L3_072_123G1_scaffold_299_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(15574..16788)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHW1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04474.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_072_123G1_scaffold_299_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17320..17652
|
Serine/threonine protein kinase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHW3_BIFBI
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFL04476.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_072_123G1_scaffold_299_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17934..20441
|
uvrA; excinuclease ABC subunit A (EC:3.6.3.28)
UvrA Excinuclease ABC subunit A n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLJ0_9BIFI
UvrA Excinuclease ABC subunit A {ECO:0000313|EMBL:CDB22116.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_072_123G1_scaffold_299_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20515..21873
|
Na+ driven multidrug efflux pump n=2 Tax=Bifidobacterium RepID=R6GCN9_9BIFI
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:KFI43005.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Na+ driven multidrug efflux pump
|
|
L3_072_123G1_scaffold_299_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
22026..22736
|
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MSY0_BIFBI
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EKF15203.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L3_072_123G1_scaffold_299_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
22739..23455
|
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MD10_BIFBI
|
|
L3_072_123G1_scaffold_299_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23502..24026
|
PadR family transcriptional regulator n=2 Tax=Bifidobacterium bifidum RepID=K2IPM7_BIFBI
PadR family transcriptional regulator {ECO:0000313|EMBL:EKE50685.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
PadR family transcriptional regulator
|
|
L3_072_123G1_scaffold_299_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24051..25028
|
Putative integral membrane permease protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLI7_9BIFI
Putative integral membrane permease protein {ECO:0000313|EMBL:CDB22111.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative integral membrane permease protein
|
|
L3_072_123G1_scaffold_299_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25054..25374)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HTE9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50683.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
|
|
L3_072_123G1_scaffold_299_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25527..26672)
|
HipA domain protein n=5 Tax=Bifidobacterium bifidum RepID=E3EP10_BIFBS
HipA domain-containing protein
HipA domain protein {ECO:0000313|EMBL:ERI82950.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98163.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|
|
L3_072_123G1_scaffold_299_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26669..26968)
|
Transcriptional regulator n=4 Tax=Bifidobacterium RepID=I3WHX3_BIFBI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFR50344.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
transcriptional regulator
|
|
L3_072_123G1_scaffold_299_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26990..27268
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EP12_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53119.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_072_123G1_scaffold_299_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27265..27471
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EP13_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53120.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_072_123G1_scaffold_299_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27581..28147
|
TetR family transcriptional regulator n=5 Tax=Bifidobacterium RepID=E3EP14_BIFBS
ybjK; putative HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:EKE50678.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_072_123G1_scaffold_299_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28284..28784
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EP15_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53122.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_072_123G1_scaffold_299_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28838..29770)
|
Transcriptional regulator, LysR family n=8 Tax=Bifidobacterium RepID=E3EP16_BIFBS
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFI43017.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_072_123G1_scaffold_299_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29978..30607)
|
HAD-superfamily hydrolase, subfamily IA, variant 3 n=3 Tax=Bifidobacterium bifidum RepID=E3EP17_BIFBS
haloacid dehalogenase
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERI82957.1}; Putative hydrolase {ECO:0000313|EMBL:BAQ98170.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|