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L3_072_123G1_scaffold_309

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_309_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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329..2905
DNA (2577bp) protein (859aa)
Protein translocase subunit SecA n=2 Tax=Ruminococcus RepID=C6JE64_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
protein translocase subunit secA
L3_072_123G1_scaffold_309_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3188..4654
DNA (1467bp) protein (489aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN44_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sodium:neurotransmitter symporter
L3_072_123G1_scaffold_309_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4784..5644)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76487.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, AraC family
L3_072_123G1_scaffold_309_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6320..7168
DNA (849bp) protein (283aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK2_9FIRM
L3_072_123G1_scaffold_309_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7527..8516
DNA (990bp) protein (330aa)
Peptide chain release factor 2 n=2 Tax=Ruminococcus RepID=C6JE68_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
bacterial peptide chain release factor 2 (bRF-2)
L3_072_123G1_scaffold_309_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8673..9128
DNA (456bp) protein (152aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein RSAG_02236 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE69_9FIRM
UPF0735 ACT domain-containing protein RSAG_02236 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_309_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9135..10349
DNA (1215bp) protein (405aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Ruminococcus RepID=C6JE70_9FIRM
L3_072_123G1_scaffold_309_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10513..11721
DNA (1209bp) protein (403aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE71_9FIRM
L3_072_123G1_scaffold_309_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11736..12758
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79395.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted integral membrane protein
L3_072_123G1_scaffold_309_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12908..14188
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76494.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted aminopeptidases
L3_072_123G1_scaffold_309_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14512..16671
DNA (2160bp) protein (720aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE74_9FIRM
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EES76495.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional accessory protein
L3_072_123G1_scaffold_309_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16759..17652)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76496.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
L3_072_123G1_scaffold_309_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17816..18049
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79399.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_309_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18078..18371
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76498.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L3_072_123G1_scaffold_309_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18678..19538
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76499.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Small-conductance mechanosensitive channel
L3_072_123G1_scaffold_309_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19930..21540
DNA (1611bp) protein (537aa)
Extracellular solute-binding protein family 5 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNY4_9FIRM
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CDD79402.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative glutathione-binding protein GsiB
L3_072_123G1_scaffold_309_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21753..22673
DNA (921bp) protein (307aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPM0_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD79403.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
gsiC; glutathione ABC transporter permease GsiC
L3_072_123G1_scaffold_309_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22687..23586
DNA (900bp) protein (300aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMG8_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD79404.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter permease
L3_072_123G1_scaffold_309_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23599..24588
DNA (990bp) protein (330aa)
Glutathione import ATP-binding protein GsiA n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN80_9FIRM
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CDD79405.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter ATP-binding protein
L3_072_123G1_scaffold_309_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24592..25566
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79406.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
peptide ABC transporter ATPase
L3_072_123G1_scaffold_309_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25647..26429
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE83_9FIRM
DeoR-family transcriptional regulator {ECO:0000313|EMBL:CDD79407.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulators of sugar metabolism
L3_072_123G1_scaffold_309_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26528..27274
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE84_9FIRM
CutC family protein {ECO:0000313|EMBL:CDD79408.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein involved in copper resistance
L3_072_123G1_scaffold_309_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27274..29775
DNA (2502bp) protein (834aa)
Transglutaminase domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMH3_9FIRM
Transglutaminase domain-containing protein {ECO:0000313|EMBL:CDD79409.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_072_123G1_scaffold_309_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29904..31214
DNA (1311bp) protein (437aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN85_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDD79410.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_309_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31295..31813)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79411.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_123G1_scaffold_309_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32059..32754
DNA (696bp) protein (232aa)
precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ2_9FIRM
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:CDD79412.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_309_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32751..33593
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE89_9FIRM
Abc transporter {ECO:0000313|EMBL:CDD79413.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type multidrug transport system, ATPase component
L3_072_123G1_scaffold_309_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33667..34398
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE90_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-2 type transporter.
L3_072_123G1_scaffold_309_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34644..37445
DNA (2802bp) protein (934aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE92_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EES76513.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
L3_072_123G1_scaffold_309_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37449..38345)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76514.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
Displaying items 1-30 of 32 in total

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