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L3_072_123G1_scaffold_373

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_373_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..292
DNA (291bp) protein (97aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) {ECO:0000313|EMBL:CEF82247.1}; EC=2.5.1.7 {ECO:0000313|EMBL:CEF82247.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Staphylococcus aureus subsp. aureus 21194 RepID=H0CBE9_STAAU
murA1; putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_072_123G1_scaffold_373_2
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

317..652
DNA (336bp) protein (112aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Staphylococcus hominis SK119 RepID=C2LXH3_STAHO
murA; putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_072_123G1_scaffold_373_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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674..2203
DNA (1530bp) protein (510aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWL6_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFR33738.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
extracellular solute-binding protein
L3_072_123G1_scaffold_373_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2271..3200
DNA (930bp) protein (310aa)
Dipeptide ABC transporter, permease protein DppB n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWL5_9FIRM
Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFR33621.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
binding-protein-dependent transport system inner membrane protein
L3_072_123G1_scaffold_373_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3208..4050
DNA (843bp) protein (281aa)
diguanylate cyclase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DC0E73
Oligopeptide ABC transporter, permease protein AppC {ECO:0000313|EMBL:EFR33690.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
binding-protein-dependent transport systems inner membrane component
L3_072_123G1_scaffold_373_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4052..5011
DNA (960bp) protein (320aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D51817
Oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:EFR33592.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ABC-type transport system, ATP-binding protein;putative oligopeptide transport system
L3_072_123G1_scaffold_373_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5013..5813
DNA (801bp) protein (267aa)
peptide ABC transporter ATPase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030EF17A
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:EFR33764.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
oppF; oligopeptide transport system, ATP-binding protein OppF
L3_072_123G1_scaffold_373_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5896..6579
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000319CC8E
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33649.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_123G1_scaffold_373_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6572..7420
DNA (849bp) protein (283aa)
molecular chaperone DnaJ n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D6ECEC
DnaJ domain protein {ECO:0000313|EMBL:EFR33741.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative DnaJ domain protein
L3_072_123G1_scaffold_373_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7531..8301)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003020DD9
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33707.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L3_072_123G1_scaffold_373_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8294..8866)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DCDB76
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_072_123G1_scaffold_373_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8964..10529)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028878C3
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR33694.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_123G1_scaffold_373_13
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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10659..11561
DNA (903bp) protein (301aa)
Arylesterase {ECO:0000313|EMBL:CRH71311.1}; EC=3.1.1.2 {ECO:0000313|EMBL:CRH71311.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D59CF0
putative 3-oxoadipate enol lactonase
L3_072_123G1_scaffold_373_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11562..12500
DNA (939bp) protein (313aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFR33600.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFR33600.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002ED7E5C
D-isomer specific 2-hydroxyacid dehydrogenase
L3_072_123G1_scaffold_373_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12577..15144
DNA (2568bp) protein (856aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EFR33699.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFR33699.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CRISPR-associated protein Cas3 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287B8A0
hypothetical protein
L3_072_123G1_scaffold_373_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15370..16074
DNA (705bp) protein (235aa)
CRISPR-associated protein Cas5, Dvulg subtype n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWK4_9FIRM
CRISPR-associated protein Cas5, Dvulg subtype {ECO:0000313|EMBL:EFR33752.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CRISPR-associated protein cas5
L3_072_123G1_scaffold_373_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16089..18023
DNA (1935bp) protein (645aa)
CRISPR-associated protein Csd1 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002890426
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EFR33734.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_123G1_scaffold_373_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18016..18870
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWK2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33656.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CRISPR-associated protein, Csd2 family
L3_072_123G1_scaffold_373_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18872..19600
DNA (729bp) protein (243aa)
CRISPR-associated protein Cas4 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWK1_9FIRM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EFR33687.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
cas4; CRISPR-associated protein cas4
L3_072_123G1_scaffold_373_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19669..20553
DNA (885bp) protein (295aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWK0_9FIRM
CRISPR-associated protein Cas1
L3_072_123G1_scaffold_373_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20555..20848
DNA (294bp) protein (98aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWJ9_9FIRM
cas2; CRISPR-associated protein cas2
L3_072_123G1_scaffold_373_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21544..23502
DNA (1959bp) protein (653aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
metG; Methionine-tRNA ligase (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E05687
L3_072_123G1_scaffold_373_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23511..24296
DNA (786bp) protein (262aa)
yabD; putative deoxyribonuclease YabD (EC:3.1.21.-)
hydrolase TatD n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E1B685
Hydrolase, TatD family {ECO:0000313|EMBL:EFR32793.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L3_072_123G1_scaffold_373_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24272..24823
DNA (552bp) protein (184aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DNA primase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002EDBCD2
primase-like protein
L3_072_123G1_scaffold_373_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24765..25667
DNA (903bp) protein (301aa)
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
16S rRNA methyltransferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DD8060
Putative dimethyladenosine transferase {ECO:0000313|EMBL:EFR32704.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L3_072_123G1_scaffold_373_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25675..26025
DNA (351bp) protein (117aa)
ArsR family transcriptional regulator n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F05BEB
Putative HTH-type transcriptional repressor CzrA {ECO:0000313|EMBL:EFR32811.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
regulatory protein ArsR
L3_072_123G1_scaffold_373_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26107..26334
DNA (228bp) protein (76aa)
glutaredoxin n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FC5A85
Glutaredoxin {ECO:0000313|EMBL:EFR32794.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_123G1_scaffold_373_28
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26542..26961
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FE6521
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
membrane protein
L3_072_123G1_scaffold_373_29
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27459..27779
DNA (321bp) protein (107aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
sodium pump decarboxylase subunit gamma n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FD0B1C
L3_072_123G1_scaffold_373_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27822..28244
DNA (423bp) protein (141aa)
Glutaconyl-CoA decarboxylase subunit gamma {ECO:0000313|EMBL:EFR32742.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EFR32742.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Glutaconyl-CoA decarboxylase subunit gamma n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZB3_9FIRM
hypothetical protein
Displaying items 1-30 of 35 in total

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