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L3_072_123G1_scaffold_397

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_397_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..914
DNA (912bp) protein (304aa)
Type VI secretion system secreted protein VgrG n=5 Tax=Escherichia coli RepID=T5PSG3_ECOLX
hypothetical protein
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EOW98293.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_123G1_scaffold_397_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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904..1665
DNA (762bp) protein (254aa)
Uncharacterized protein n=154 Tax=Escherichia RepID=Q1RBV9_ECOUT
zinc-dependent metallopeptidase
Putative zinc-dependent metallopeptidase {ECO:0000313|EMBL:CAR02869.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_072_123G1_scaffold_397_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2034..2501
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE53 RepID=L3L4Q2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE07156.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_072_123G1_scaffold_397_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2835..3050
DNA (216bp) protein (72aa)
Uncharacterized protein n=286 Tax=Escherichia RepID=B7MMU5_ECO45
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI15016.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_123G1_scaffold_397_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3367..3936)
DNA (570bp) protein (190aa)
Uncharacterized protein yddH n=279 Tax=Escherichia RepID=E2QM18_ECOLX
yddH; hypothetical protein
Flavin reductase like domain protein {ECO:0000313|EMBL:EZJ52169.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L3_072_123G1_scaffold_397_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4111..4956
DNA (846bp) protein (282aa)
nhoA; N-hydroxyarylamine O-acetyltransferase (EC:2.3.1.118)
N-acetyltransferase n=17 Tax=Escherichia coli RepID=D8BCP1_ECOLX
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:ELJ73858.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_123G1_scaffold_397_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5052..5945)
DNA (894bp) protein (298aa)
Uncharacterized isomerase yddE n=52 Tax=Escherichia coli RepID=E2QM20_ECOLX
yddE; isomerase yddE
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ESD32093.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_072_123G1_scaffold_397_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6025..6705)
DNA (681bp) protein (227aa)
nitrate reductase 2 subunit gamma (EC:1.7.99.4)
Nitrate reductase 2, gamma subunit n=25 Tax=Escherichia coli RepID=Q0THV5_ECOL5
Respiratory nitrate reductase 2 gamma chain {ECO:0000313|EMBL:EQP56420.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_123G1_scaffold_397_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6702..7397)
DNA (696bp) protein (232aa)
respiratory nitrate reductase 2 subunit delta (EC:1.7.99.4)
Respiratory nitrate reductase 2 delta chain n=24 Tax=Escherichia coli RepID=Q0THV4_ECOL5
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EOW98301.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_123G1_scaffold_397_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7397..8941)
DNA (1545bp) protein (515aa)
respiratory nitrate reductase 2 subunit beta (EC:1.7.99.4)
Respiratory nitrate reductase 2 beta chain n=14 Tax=Escherichia coli RepID=Q0THV3_ECOL5
Nitrate reductase {ECO:0000313|EMBL:AJO83464.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_123G1_scaffold_397_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8938..12678)
DNA (3741bp) protein (1247aa)
respiratory nitrate reductase 2 subunit a (EC:1.7.99.4)
Respiratory nitrate reductase 2 a chain n=17 Tax=Escherichia coli RepID=Q0THV2_ECOL5
NarZ protein; Respiratory nitrate reductase 2 alpha chain {ECO:0000313|EMBL:CDN82018.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_072_123G1_scaffold_397_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12773..14161)
DNA (1389bp) protein (463aa)
Nitrite extrusion protein 2 n=262 Tax=Escherichia RepID=E2QM25_ECOLX
narU; nitrite extrusion protein 2
Nitrite extrusion protein 2 {ECO:0000313|EMBL:EOU79769.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L3_072_123G1_scaffold_397_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14434..15258)
DNA (825bp) protein (275aa)
Inner membrane protein yddG n=260 Tax=Escherichia RepID=E2QM26_ECOLX
hypothetical protein
Aromatic amino acid exporter {ECO:0000313|EMBL:EHU29262.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L3_072_123G1_scaffold_397_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15548..16135
DNA (588bp) protein (196aa)
formate dehydrogenase, subunit alpha (EC:1.7.99.4)
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:EFK01325.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EFK01325.1};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=9 Tax=Escherichia RepID=B7LQW5_ESCF3
L3_072_123G1_scaffold_397_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16184..18595
DNA (2412bp) protein (804aa)
fdnG; formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing protein (EC:1.2.1.2)
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=208 Tax=Escherichia RepID=B7MMV5_ECO45
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:ELJ73867.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_123G1_scaffold_397_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18608..19492
DNA (885bp) protein (295aa)
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit n=56 Tax=Escherichia coli RepID=E2QM28_ECOLX
fdnH; Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit {ECO:0000313|EMBL:EOU96275.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L3_072_123G1_scaffold_397_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19485..20138
DNA (654bp) protein (218aa)
fdnI; formate dehydrogenase subunit gamma (EC:1.2.1.2)
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EHU59810.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EHU59810.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Formate dehydrogenase, nitrate-inducible, cytochrome n=231 Tax=Escherichia RepID=E2QM29_ECOLX
L3_072_123G1_scaffold_397_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20367..20651)
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=J7R0W1_ECOLX
yddM; putative DNA-binding transcriptional regulator
Addiction module antidote protein HigA {ECO:0000313|EMBL:EIG83836.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L3_072_123G1_scaffold_397_19
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20651..20929)
DNA (279bp) protein (93aa)
Uncharacterized protein n=310 Tax=Escherichia RepID=B7MMV9_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC78395.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_072_123G1_scaffold_397_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21025..21195
DNA (171bp) protein (57aa)
Uncharacterized protein n=21 Tax=Escherichia coli RepID=L3DQX1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP56432.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L3_072_123G1_scaffold_397_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21115..22125)
DNA (1011bp) protein (337aa)
adhA, adhP; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, propanol-preferring {ECO:0000313|EMBL:ABE07174.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ABE07174.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Alcohol dehydrogenase I n=24 Tax=Escherichia coli RepID=Q0THU2_ECOL5
L3_072_123G1_scaffold_397_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22259..23956)
DNA (1698bp) protein (566aa)
maeA; NAD-dependent malic enzyme (EC:1.1.1.38)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
NAD-dependent malic enzyme n=214 Tax=Escherichia RepID=MAO1_ECO27
L3_072_123G1_scaffold_397_23
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24113..24250)
DNA (138bp) protein (46aa)
Stationary-phase-induced ribosome-associated protein n=1369 Tax=Enterobacteriaceae RepID=SRA_ECO57
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L3_072_123G1_scaffold_397_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24352..24567)
DNA (216bp) protein (72aa)
Protein bdm homolog n=1105 Tax=cellular organisms RepID=BDM_ECO57
Biofilm-dependent modulation protein Bdm, putative
Putative biofilm-dependent modulation protein {ECO:0000313|EMBL:EII21595.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_072_123G1_scaffold_397_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24912..25343
DNA (432bp) protein (144aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin osmC {ECO:0000313|EMBL:EZJ52188.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EZJ52188.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Peroxiredoxin OsmC n=833 Tax=Enterobacteriaceae RepID=OSMC_ECOLI
L3_072_123G1_scaffold_397_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25533..27932)
DNA (2400bp) protein (800aa)
Heme-regulated cyclic AMP phosphodiesterase {ECO:0000313|EMBL:CDL47708.1}; EC=3.1.4.- {ECO:0000313|EMBL:CDL47708.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
PAS domain S-box protein n=28 Tax=Escherichia coli RepID=D8BCL9_ECOLX
cAMP phosphodiesterase
L3_072_123G1_scaffold_397_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28499..29818)
DNA (1320bp) protein (440aa)
Lipoprotein n=21 Tax=Escherichia coli RepID=L3DRK6_ECOLX
lipoprotein YddW precursor
Putative lipoprotein {ECO:0000313|EMBL:CAR02894.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_072_123G1_scaffold_397_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29949..31484)
DNA (1536bp) protein (512aa)
Amino acid antiporter n=25 Tax=Escherichia coli RepID=Q0THT4_ECOL5
amino acid antiporter
Glutamate:gamma-aminobutyrate antiporter {ECO:0000313|EMBL:EOV09632.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L3_072_123G1_scaffold_397_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31640..31732)
DNA (93bp) protein (31aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glutamate decarboxylase n=1 Tax=Escherichia coli ATCC 25922 RepID=R9EDW3_ECOLX
gadB; glutamate decarboxylase
Displaying 29 items

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