ggKbase home page

L3_072_123G1_scaffold_417

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_417_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..185)
DNA (183bp) protein (61aa)
Biotin-requiring enzyme (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U8_9ACTO
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:KGF02130.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
L3_072_123G1_scaffold_417_2
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(224..1597)
DNA (1374bp) protein (458aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D5FB56 related cluster n=1 Tax=unknown RepID=UPI0003D5FB56
dihydrolipoamide dehydrogenase
L3_072_123G1_scaffold_417_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1774..3393)
DNA (1620bp) protein (540aa)
leucyl aminopeptidase (EC:3.4.11.1)
UPI0003D67505 related cluster n=1 Tax=unknown RepID=UPI0003D67505
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_123G1_scaffold_417_4
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3566..3970
DNA (405bp) protein (135aa)
UPI0003069570 related cluster n=1 Tax=unknown RepID=UPI0003069570
Uncharacterized protein {ECO:0000313|EMBL:ETJ04682.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
integral membrane protein
L3_072_123G1_scaffold_417_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3967..5874)
DNA (1908bp) protein (636aa)
Chloride transporter, ClC family n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U3_9ACTO
Chloride transporter, ClC family {ECO:0000313|EMBL:EEH66619.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_123G1_scaffold_417_6
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5880..7901)
DNA (2022bp) protein (674aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEH66618.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEH66618.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
peptidase S9, prolyl oligopeptidase active site region (EC:3.4.19.1)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U2_9ACTO
L3_072_123G1_scaffold_417_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8176..10212
DNA (2037bp) protein (679aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U1_9ACTO
deoxyxylulose-5-phosphate synthase
L3_072_123G1_scaffold_417_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10497..12617
DNA (2121bp) protein (707aa)
Formate C-acetyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3U0_9ACTO
Formate acetyltransferase {ECO:0000313|EMBL:KGF02124.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
formate acetyltransferase
L3_072_123G1_scaffold_417_9
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12707..12952
DNA (246bp) protein (82aa)
Putative autonomous glycyl radical cofactor GrcA n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T9_9ACTO
Formate acetyltransferase {ECO:0000313|EMBL:KGF02123.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
formate acetyltransferase
L3_072_123G1_scaffold_417_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12978..13862
DNA (885bp) protein (295aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T8_9ACTO
pyruvate formate lyase-activating protein
L3_072_123G1_scaffold_417_11
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13947..15242)
DNA (1296bp) protein (432aa)
3'-5' exonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T7_9ACTO
3'-5' exonuclease {ECO:0000313|EMBL:KGF01815.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ribonuclease D
L3_072_123G1_scaffold_417_12
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15239..15850)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH66612.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_123G1_scaffold_417_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16005..17258
DNA (1254bp) protein (418aa)
Uncharacterized protein n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T5_9ACTO
ATP-dependent carboxylate-amine ligase {ECO:0000313|EMBL:KGF01813.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
ATP-grasp protein-like protein
L3_072_123G1_scaffold_417_14
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17227..19491)
DNA (2265bp) protein (755aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D65D82 related cluster n=1 Tax=unknown RepID=UPI0003D65D82
glycogen debranching protein GlgX
L3_072_123G1_scaffold_417_15
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19871..21100
DNA (1230bp) protein (410aa)
ATP-grasp domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T3_9ACTO
Carboxylate--amine ligase {ECO:0000313|EMBL:KGF03845.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
L3_072_123G1_scaffold_417_16
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21204..22277
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T2_9ACTO
FemAB family protein {ECO:0000313|EMBL:KGF03844.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
peptidoglycan bridge formation protein FemAB
L3_072_123G1_scaffold_417_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22367..24406
DNA (2040bp) protein (680aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
Threonine--tRNA ligase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T1_9ACTO
threonine--tRNA ligase
L3_072_123G1_scaffold_417_18
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24403..25053
DNA (651bp) protein (217aa)
Histidine triad domain protein n=3 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3T0_9ACTO
Histidine triad domain protein {ECO:0000313|EMBL:EEH66606.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
L3_072_123G1_scaffold_417_19
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25109..25771
DNA (663bp) protein (221aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S9_9ACTO
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ETJ02115.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
CDP-alcohol phosphatidyltransferase
L3_072_123G1_scaffold_417_20
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25768..26844
DNA (1077bp) protein (359aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S8_9ACTO
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KGF03840.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
lipid A biosynthesis acyltransferase
L3_072_123G1_scaffold_417_21
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26841..28031
DNA (1191bp) protein (397aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEH66603.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEH66603.1};; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S7_9ACTO
group 1 glycosyl transferase
L3_072_123G1_scaffold_417_22
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28028..28696
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEH66602.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
L3_072_123G1_scaffold_417_23
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28693..29817
DNA (1125bp) protein (375aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3S5_9ACTO
Putative integral membrane protein {ECO:0000313|EMBL:ETJ02119.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
membrane protein
L3_072_123G1_scaffold_417_24
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29814..30449
DNA (636bp) protein (212aa)
UPI0003D63AAB related cluster n=1 Tax=unknown RepID=UPI0003D63AAB
MutT family protein {ECO:0000313|EMBL:ETJ02120.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
NUDIX hydrolase
L3_072_123G1_scaffold_417_25
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30542..30727
DNA (186bp) protein (62aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
UPI0003D62C47 related cluster n=1 Tax=unknown RepID=UPI0003D62C47
pyridoxine biosynthesis protein
Displaying 25 items

View Taxonomy