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L3_072_123G1_scaffold_449

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_449_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(480..1757)
DNA (1278bp) protein (426aa)
membrane protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DCB73D
UPF0597 protein RSAG_02535 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine dehydratase subunit alpha
L3_072_123G1_scaffold_449_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1832..3175)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF19_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES76366.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L3_072_123G1_scaffold_449_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3165..3617)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79578.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulators
L3_072_123G1_scaffold_449_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3810..4742
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79579.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permeases
L3_072_123G1_scaffold_449_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4782..5324
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79580.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L3_072_123G1_scaffold_449_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5757..6395)
DNA (639bp) protein (213aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LKR1_9FIRM
Putative KHG/KDPG aldolase {ECO:0000313|EMBL:ERI93138.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_072_123G1_scaffold_449_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6454..7506)
DNA (1053bp) protein (351aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=1 Tax=Blautia sp. KLE 1732 RepID=U2EF29_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:ERI93137.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_072_123G1_scaffold_449_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7509..9254)
DNA (1746bp) protein (582aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Putative dihydroxy-acid dehydratase n=1 Tax=Blautia sp. KLE 1732 RepID=U2EJS4_9FIRM
Putative dihydroxy-acid dehydratase {ECO:0000313|EMBL:ERI93136.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_072_123G1_scaffold_449_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9317..9553)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D8M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93135.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_072_123G1_scaffold_449_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9566..10921)
DNA (1356bp) protein (452aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Blautia sp. KLE 1732 RepID=U2CRK0_9FIRM
Transporter, gluconate:H+ symporter family {ECO:0000313|EMBL:ERI93134.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
gluconate:H+ symporter, GntP family
L3_072_123G1_scaffold_449_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11204..11890
DNA (687bp) protein (229aa)
FCD domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D9X5_9FIRM
FCD domain protein {ECO:0000313|EMBL:ERI93133.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
transcriptional regulator, GntR family
L3_072_123G1_scaffold_449_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11964..12725)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031BCF20
ABC transporter {ECO:0000313|EMBL:CDD79581.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_072_123G1_scaffold_449_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12722..13516)
DNA (795bp) protein (265aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG2_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD79582.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_072_123G1_scaffold_449_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13615..15153)
DNA (1539bp) protein (513aa)
ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F7F28E
Uncharacterized protein {ECO:0000313|EMBL:EES76375.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type dipeptide transport system, periplasmic component
L3_072_123G1_scaffold_449_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15188..16054)
DNA (867bp) protein (289aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW5_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD79584.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_072_123G1_scaffold_449_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16051..16995)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76377.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_072_123G1_scaffold_449_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17495..18403)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F6C249
Uncharacterized protein {ECO:0000313|EMBL:CDD79586.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L3_072_123G1_scaffold_449_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18443..19837)
DNA (1395bp) protein (465aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF33_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mg2+ transporter (mgtE)
L3_072_123G1_scaffold_449_19
unknown

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comp(20133..20267)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_072_123G1_scaffold_449_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20596..21264
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent beta subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ44_9FIRM
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CDD79588.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_449_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21284..22153
DNA (870bp) protein (290aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW9_9FIRM
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDD79589.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_449_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22233..22868)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF36_9FIRM
Integral membrane protein {ECO:0000313|EMBL:CDD79590.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
integral membrane protein
L3_072_123G1_scaffold_449_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23214..24305
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76384.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein, putative toxin regulator
L3_072_123G1_scaffold_449_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24473..24925)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76385.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_449_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24992..26530
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76386.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_449_26
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26681..27124
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68110.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
transposase
L3_072_123G1_scaffold_449_27
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27087..28439
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69470.1}; Flags: Fragment;; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
transposase
Displaying 27 items

View Taxonomy