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L3_072_123G1_scaffold_459

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_459_1
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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3..1430
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CX16_METMJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE55100.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp. MH98A.;"
L3_072_123G1_scaffold_459_2
unknown

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1458..3254
DNA (1797bp) protein (599aa)

This feature has no annotations

L3_072_123G1_scaffold_459_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3328..5010)
DNA (1683bp) protein (561aa)
GH3 auxin-responsive promoter n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHP3_9CLOT
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EKY27534.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
plant auxin-responsive GH3-like protein
L3_072_123G1_scaffold_459_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5549..6904
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97163.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
trkA; potassium transporter peripheral membrane component
L3_072_123G1_scaffold_459_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6910..8226
DNA (1317bp) protein (439aa)
TrkH family potassium uptake protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD06_9CLOT
TrkH family potassium uptake protein {ECO:0000313|EMBL:EEH97164.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
trkH; Trk system potassium uptake protein TrkH
L3_072_123G1_scaffold_459_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8410..9156)
DNA (747bp) protein (249aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW46_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEG75885.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative polyferredoxin
L3_072_123G1_scaffold_459_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9326..10102
DNA (777bp) protein (259aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CJS7_CLOSO
Nitroreductase {ECO:0000313|EMBL:CEQ30523.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
4fe-4s binding domain protein
L3_072_123G1_scaffold_459_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10118..10483
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=8 Tax=Clostridium difficile RepID=U3VMR0_CLODI
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EHJ32507.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
ArsR family transcriptional regulator
L3_072_123G1_scaffold_459_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10533..12479)
DNA (1947bp) protein (649aa)
NADH oxidase n=1 Tax=Blautia producta RepID=UPI00036E365C
NADH oxidase {ECO:0000313|EMBL:KGJ51147.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_072_123G1_scaffold_459_10
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12636..13703)
DNA (1068bp) protein (356aa)
AraC family transcriptional regulator (EC:3.2.1.37)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LXY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85506.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_072_123G1_scaffold_459_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13912..14730
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_123G1_scaffold_459_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14928..15053
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LUP6_CLOB8
hypothetical protein
Cytochrome C551 {ECO:0000313|EMBL:ETD67560.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_072_123G1_scaffold_459_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15408..16655
DNA (1248bp) protein (416aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6K2_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sugar phosphotransferase system (PTS), IIC component
L3_072_123G1_scaffold_459_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16655..18436
DNA (1782bp) protein (594aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycosyl hydrolase family protein (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET5_9CLOT
L3_072_123G1_scaffold_459_15
unknown

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comp(18586..18963)
DNA (378bp) protein (126aa)

This feature has no annotations

L3_072_123G1_scaffold_459_16
unknown

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comp(19102..19335)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_072_123G1_scaffold_459_17
unknown

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19593..19901
DNA (309bp) protein (103aa)

This feature has no annotations

L3_072_123G1_scaffold_459_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20249..21517
DNA (1269bp) protein (423aa)
Branched-chain amino acid transport system II carrier protein n=2 Tax=Clostridium botulinum B RepID=B2TN46_CLOBB
brnQ; branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ACD22958.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_123G1_scaffold_459_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21555..21953)
DNA (399bp) protein (133aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG28_9CLOT
merR regulatory family protein
MerR regulatory family protein {ECO:0000313|EMBL:AIY83412.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_123G1_scaffold_459_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22055..22900
DNA (846bp) protein (282aa)
Organophosphate reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH54_9CLOT
Organophosphate reductase {ECO:0000313|EMBL:EKY26917.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
aldo/keto reductase family protein
L3_072_123G1_scaffold_459_21
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22918..23496
DNA (579bp) protein (193aa)
fructose-2,6-bisphosphatase (EC:5.4.2.1)
Fructose-2,6-bisphosphatase n=1 Tax=Clostridium intestinale URNW RepID=U2NLC3_9CLOT
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:ERK29943.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L3_072_123G1_scaffold_459_22
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(23527..23964)
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QE37_CALH1
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADQ06531.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
L3_072_123G1_scaffold_459_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24162..24359
DNA (198bp) protein (66aa)
Conserved domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2V8_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT71870.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
transcriptional regulator
L3_072_123G1_scaffold_459_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24374..25300
DNA (927bp) protein (309aa)
replisome organizer region-containing protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030935C7
Phage replisome organizer region-containing protein {ECO:0000313|EMBL:KEH91646.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
phage replisome organizer
L3_072_123G1_scaffold_459_25
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25245..25976
DNA (732bp) protein (244aa)
ATPase AAA n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G590_CLOPA
ATPase AAA {ECO:0000313|EMBL:ETD70847.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_072_123G1_scaffold_459_26
unknown

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26067..26270
DNA (204bp) protein (68aa)

This feature has no annotations

L3_072_123G1_scaffold_459_27
unknown

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26215..26337
DNA (123bp) protein (41aa)

This feature has no annotations

L3_072_123G1_scaffold_459_28
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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26486..27403
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00036FA4EC
aminoglycoside phosphotransferase
Tax=BJP_IG2102_Acholeplasmatales_34_18
L3_072_123G1_scaffold_459_29
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27880..28083
DNA (204bp) protein (68aa)
Chitinase A n=1 Tax=Clostridium paraputrificum RepID=Q9ZNL0_9CLOT
Chitinase A {ECO:0000313|EMBL:BAA34922.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
glycosyl hydrolases 18 family protein
Displaying 29 items

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