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L3_072_123G1_scaffold_478

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_478_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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258..1301
DNA (1044bp) protein (348aa)
Transposase IS116/IS110/IS902 family./Transposase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJ37_9FIRM
Transposase IS116/IS110/IS902 family./Transposase.
Transposase IS116/IS110/IS902 family./Transposase {ECO:0000313|EMBL:CBK93634.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_072_123G1_scaffold_478_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1408..1581)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80214.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
alpha-L-arabinofuranosidase
L3_072_123G1_scaffold_478_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1854..2690)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76224.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative esterase
L3_072_123G1_scaffold_478_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2797..3048)
DNA (252bp) protein (84aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRZ2_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDD80218.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage III sporulation protein D.
L3_072_123G1_scaffold_478_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3320..4546)
DNA (1227bp) protein (409aa)
Serine/threonine transporter SstT n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL4_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Na+/serine symporter
L3_072_123G1_scaffold_478_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4709..5332)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76247.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_123G1_scaffold_478_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5694..5966
DNA (273bp) protein (91aa)
DNA damage-inducible protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQR2_9FIRM
DNA damage-inducible protein {ECO:0000313|EMBL:CCZ78079.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RelB/DinJ family addiction module antitoxin
L3_072_123G1_scaffold_478_8
Cyanobacterium stanieri, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5959..6225
DNA (267bp) protein (89aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YKJ0_CYASC
Txe/YoeB family addiction module toxin
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:AFZ46915.1}; TaxID=292563 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).;"
L3_072_123G1_scaffold_478_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6255..7400)
DNA (1146bp) protein (382aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR5_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:EES76248.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_478_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7631..8209)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76249.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator
L3_072_123G1_scaffold_478_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8404..8886
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76252.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted metal-binding protein (DUF2284).
L3_072_123G1_scaffold_478_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8949..9350)
DNA (402bp) protein (134aa)
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6A6_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component {ECO:0000313|EMBL:CCY32497.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_072_123G1_scaffold_478_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9357..9920)
DNA (564bp) protein (188aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LGT6_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:CBL19047.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_072_123G1_scaffold_478_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10158..11564)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80602.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_123G1_scaffold_478_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11557..12228)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80600.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative membrane spanning protein
L3_072_123G1_scaffold_478_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12225..12977)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76266.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_123G1_scaffold_478_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12964..14757)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76267.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
membrane lipoprotein lipid attachment site
L3_072_123G1_scaffold_478_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14744..16213)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76268.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative membrane spanning protein
L3_072_123G1_scaffold_478_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16194..17645)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80594.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glycosyl transferase (group 1)
L3_072_123G1_scaffold_478_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17642..19480)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76270.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_123G1_scaffold_478_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19468..20361)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFT8_9FIRM
Membrane protein {ECO:0000313|EMBL:CDD80591.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_123G1_scaffold_478_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20358..22466)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76272.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_123G1_scaffold_478_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22702..24816
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76273.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Peptidase family M28.
L3_072_123G1_scaffold_478_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24881..25522
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80587.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acetyltransferases
L3_072_123G1_scaffold_478_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25871..26245
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80586.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted transcriptional regulator
L3_072_123G1_scaffold_478_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26328..26651)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80585.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Displaying 26 items

View Taxonomy