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L3_072_123G1_scaffold_488

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_488_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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332..1699
DNA (1368bp) protein (456aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD29_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD80483.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
extracellular solute-binding protein
L3_072_123G1_scaffold_488_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1995..2897
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77077.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
binding-protein-dependent transport system inner membrane protein
L3_072_123G1_scaffold_488_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2901..3749
DNA (849bp) protein (283aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRB6_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD80481.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
binding-protein-dependent transport systems inner membrane component
L3_072_123G1_scaffold_488_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3871..5670
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR55_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_072_123G1_scaffold_488_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5663..7222
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JD25_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CDD80479.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
response regulator receiver protein
L3_072_123G1_scaffold_488_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7303..9423
DNA (2121bp) protein (707aa)
Glycoside hydrolase family 3 domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSP5_9FIRM
Glycoside hydrolase family 3 domain-containing protein {ECO:0000313|EMBL:CDD80478.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Beta-glucosidase-related glycosidases
L3_072_123G1_scaffold_488_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9509..10579
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80477.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_488_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10759..11997
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRB0_9FIRM
L3_072_123G1_scaffold_488_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12259..13176
DNA (918bp) protein (306aa)
Thioredoxin reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F9853D
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CDD80475.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_488_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13279..13581
DNA (303bp) protein (101aa)
Thioredoxin n=2 Tax=Ruminococcus RepID=C6JD20_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
thioredoxin
L3_072_123G1_scaffold_488_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13588..15264
DNA (1677bp) protein (559aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80473.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_123G1_scaffold_488_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15279..15383
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80472.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_123G1_scaffold_488_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15404..16000
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80471.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Hydrogenase maturation factor
L3_072_123G1_scaffold_488_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16071..16571
DNA (501bp) protein (167aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Ruminococcus RepID=C6JD16_9FIRM
L3_072_123G1_scaffold_488_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16599..17168
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80469.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator
L3_072_123G1_scaffold_488_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17493..19469
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80468.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
myosin-cross-reactive antigen
L3_072_123G1_scaffold_488_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19748..21472
DNA (1725bp) protein (575aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS36_9FIRM
L3_072_123G1_scaffold_488_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21657..23069)
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD12_9FIRM
Signal transduction histidine kinase
L3_072_123G1_scaffold_488_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23066..23767)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77060.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_123G1_scaffold_488_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23779..26160)
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD10_9FIRM
MutS2 family protein
Displaying 20 items

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