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L3_072_123G1_scaffold_490

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_490_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..82)
DNA (81bp) protein (27aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M1L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75733.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_490_2
unknown

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comp(506..604)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_072_123G1_scaffold_490_3
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(611..1066)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B40B42
Uncharacterized protein {ECO:0000313|EMBL:EMZ20461.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_072_123G1_scaffold_490_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1219..3681)
DNA (2463bp) protein (821aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK1_9FIRM
L3_072_123G1_scaffold_490_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4071..7226)
DNA (3156bp) protein (1052aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU1_9FIRM
L3_072_123G1_scaffold_490_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8040..9275
DNA (1236bp) protein (412aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75747.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_490_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9246..10205)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75748.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Inhibitor of the KinA pathway to sporulation, predicted exonuclease
L3_072_123G1_scaffold_490_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10266..11390)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75749.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized Fe-S center protein
L3_072_123G1_scaffold_490_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11480..11725)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75750.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_123G1_scaffold_490_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11959..13641)
DNA (1683bp) protein (561aa)
Phosphomannomutase (EC:5.4.2.8)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75751.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_123G1_scaffold_490_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13742..14629)
DNA (888bp) protein (296aa)
Oligopeptide ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CD82_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD75900.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_072_123G1_scaffold_490_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14626..15630)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGU9_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD75899.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_072_123G1_scaffold_490_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15630..16541)
DNA (912bp) protein (304aa)
Oligopeptide/dipeptide ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEZ1_9FIRM
Oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:CDD75898.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_072_123G1_scaffold_490_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16534..17547)
DNA (1014bp) protein (338aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGV1_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES75755.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L3_072_123G1_scaffold_490_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17694..19235)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV2_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD76595.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide transport system, periplasmic component
L3_072_123G1_scaffold_490_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19464..19583)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKR0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDY34126.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L3_072_123G1_scaffold_490_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19670..20008)
DNA (339bp) protein (113aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKR7_9FIRM
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EDY34133.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
addiction module toxin, RelE/StbE family
L3_072_123G1_scaffold_490_18
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20005..20313)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73712.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
addiction module antitoxin, RelB/DinJ family
L3_072_123G1_scaffold_490_19
unknown

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comp(20273..20455)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_072_123G1_scaffold_490_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20471..22351)
DNA (1881bp) protein (627aa)
KaiC n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVH8_9FIRM
KaiC.
KaiC {ECO:0000313|EMBL:CBL24786.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_123G1_scaffold_490_21
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22384..24111)
DNA (1728bp) protein (576aa)
MobA/MobL family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVH7_9FIRM
MobA/MobL family.
MobA/MobL family {ECO:0000313|EMBL:CBL24785.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_123G1_scaffold_490_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24111..24476)
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=B7C9B8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13663.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_072_123G1_scaffold_490_23
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24652..26274)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS71563.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ATP/GTP binding protein
Displaying 23 items

View Taxonomy