ggKbase home page

L3_072_123G1_scaffold_562

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_123G1_scaffold_562_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(86..478)
DNA (393bp) protein (131aa)
Membrane protein with 5 predicted TMS n=1 Tax=Lactobacillus gasseri K7 RepID=S1S849_9LACO
GaaB protein {ECO:0000313|EMBL:BAG66052.1}; Membrane protein with 5 predicted TMS {ECO:0000313|EMBL:BAH08710.1}; TaxID=1596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri.;"
L3_072_123G1_scaffold_562_2
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(638..1372)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SM67_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHA98016.1}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6.2.;"
L3_072_123G1_scaffold_562_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1552..3495)
DNA (1944bp) protein (648aa)
PTS system sucrose-specific IIBC component {ECO:0000313|EMBL:EFB62188.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFB62188.1};; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
PTS system sucrose-specific transporter subunits IIBCA n=1 Tax=Lactobacillus gasseri K7 RepID=S1RXN9_9LACO
sucrose PTS, EIIBCA
L3_072_123G1_scaffold_562_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3732..5201
DNA (1470bp) protein (490aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V6R8_9LACO
sucrose-6-phosphate hydrolase
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:AJC08639.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5212..6198
DNA (987bp) protein (329aa)
Sucrose operon repressor n=1 Tax=Lactobacillus gasseri K7 RepID=S1S042_9LACO
sucrose operon repressor
Sucrose operon repressor {ECO:0000313|EMBL:AJC08640.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6238..7014)
DNA (777bp) protein (259aa)
Protein tyrosine/serine phosphatase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S853_9LACO
phosphatase
Phosphatase {ECO:0000313|EMBL:AJC08648.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7231..8049
DNA (819bp) protein (273aa)
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SM72_9LACO
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AJC08649.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_8
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8122..8805
DNA (684bp) protein (228aa)
CobB/CobQ-like protein n=2 Tax=Lactobacillus gasseri RepID=C4VSG1_9LACO
cobyric acid synthase
Uncharacterized protein {ECO:0000313|EMBL:AEB94015.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_072_123G1_scaffold_562_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8786..10174
DNA (1389bp) protein (463aa)
Amino acid transporter n=1 Tax=Lactobacillus gasseri K7 RepID=S1SRK6_9LACO
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AJC08651.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10234..11127)
DNA (894bp) protein (298aa)
DMT family permease n=1 Tax=Lactobacillus gasseri K7 RepID=S1S047_9LACO
DMT family permease
Putative membrane protein {ECO:0000313|EMBL:EFB62195.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_072_123G1_scaffold_562_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11668..12555
DNA (888bp) protein (296aa)
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
Aspartate--ammonia ligase n=2 Tax=Lactobacillus gasseri RepID=C4VSG4_9LACO
L3_072_123G1_scaffold_562_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12585..13805)
DNA (1221bp) protein (407aa)
Immunity protein PlnI n=1 Tax=Lactobacillus gasseri K7 RepID=S1SM77_9LACO
immunity protein PlnI
CAAX amino protease family protein {ECO:0000313|EMBL:KFL96431.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_072_123G1_scaffold_562_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13900..15300)
DNA (1401bp) protein (467aa)
Amino acid transporter n=1 Tax=Lactobacillus gasseri K7 RepID=S1RXP6_9LACO
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AJC08653.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15318..16043)
DNA (726bp) protein (242aa)
Glutamine amidotransferase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SRL1_9LACO
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:AJC08654.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16205..17587)
DNA (1383bp) protein (461aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V6Q0_9LACO
Amino acid permease {ECO:0000313|EMBL:KFL96428.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
amino acid transporter
L3_072_123G1_scaffold_562_16
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17577..18968)
DNA (1392bp) protein (464aa)
Amino acid transporter n=1 Tax=Lactobacillus gasseri K7 RepID=S1S865_9LACO
alanine glycine permease
Alanine glycine permease {ECO:0000313|EMBL:AJC08655.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_17
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19126..19488)
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Lactobacillus gasseri RepID=C4VSH0_9LACO
seryl-tRNA synthetase
Seryl-tRNA synthetase {ECO:0000313|EMBL:AJC08656.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_18
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19551..20480)
DNA (930bp) protein (310aa)
PTS system, mannose/fructose/sorbose family, IID component n=7 Tax=Lactobacillus gasseri RepID=C4VSH1_9LACO
PTS mannose transporter subunit IID
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EFB62204.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_072_123G1_scaffold_562_19
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20509..21312)
DNA (804bp) protein (268aa)
PTS system sorbose-specific iic component n=3 Tax=Lactobacillus gasseri RepID=C4VSH2_9LACO
PTS alpha-glucoside transporter subunit IIBC
PTS alpha-glucoside transporter subunit IIBC {ECO:0000313|EMBL:AJC08658.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_072_123G1_scaffold_562_20
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21334..22332)
DNA (999bp) protein (333aa)
PTS system mannost-specific transporter subunits IIAB n=1 Tax=Lactobacillus gasseri K7 RepID=S1S055_9LACO
PTS mannose transporter subunit IIAB
PTS mannose transporter subunit IIAB {ECO:0000313|EMBL:AJC08659.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Displaying 20 items

View Taxonomy