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L3_072_243G1_scaffold_1718

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_1718_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..464)
DNA (462bp) protein (154aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=21 Tax=Escherichia coli RepID=E0R760_ECOLX
L3_072_243G1_scaffold_1718_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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702..917
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=4 Tax=Enterobacteriaceae RepID=R4YIT2_KLEPN
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_072_243G1_scaffold_1718_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1028..2773
DNA (1746bp) protein (582aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S3_C2.;"
DNA primase n=29 Tax=Escherichia RepID=D8BDL3_ECOLX
dnaG; DNA primase
L3_072_243G1_scaffold_1718_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2968..4809
DNA (1842bp) protein (614aa)
RNA polymerase sigma factor RpoD n=774 Tax=Enterobacteriaceae RepID=C3STY7_ECOLX
rpoD; RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L3_072_243G1_scaffold_1718_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4887..5105)
DNA (219bp) protein (73aa)
G/U mismatch-specific DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; EC=3.2.2.28 {ECO:0000256|HAMAP-Rule:MF_01956};; Double-strand-specific uracil glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; Mismatch-specific uracil DNA-glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
G/U mismatch-specific DNA glycosylase n=1 Tax=Escherichia coli ThroopD RepID=M9DME5_ECOLX
uracil-DNA glycosylase
Displaying 5 items

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