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L3_072_243G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_27_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(212..670)
DNA (459bp) protein (153aa)
Uncharacterized protein n=116 Tax=Clostridium difficile RepID=C9XJC6_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE64578.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_243G1_scaffold_27_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(715..1503)
DNA (789bp) protein (263aa)
N-acetylmuramoyl-L-alanine amidase family protein n=140 Tax=Clostridium difficile RepID=C9XJC7_CLODC
phage-related cell wall hydrolase (endolysin)
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EQH99536.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_072_243G1_scaffold_27_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1642..2079)
DNA (438bp) protein (146aa)
putative dCMP deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region family protein n=114 Tax=Clostridium difficile RepID=T2TIP7_CLODI
Cytidine and deoxycytidylate deaminase zinc-binding region family protein {ECO:0000313|EMBL:EQI84029.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_072_243G1_scaffold_27_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2313..2516)
DNA (204bp) protein (68aa)
Uncharacterized protein n=211 Tax=Clostridium difficile RepID=C9XJC9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFH07165.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L3_072_243G1_scaffold_27_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2901..3410
DNA (510bp) protein (170aa)
Helix-turn-helix family protein n=2 Tax=Clostridium difficile RepID=T4PFV9_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQI84031.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
phage repressor
L3_072_243G1_scaffold_27_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4315..5115)
DNA (801bp) protein (267aa)
ABC transporter, permease protein n=205 Tax=Clostridium difficile RepID=C9XJD3_CLODC
ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE64612.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_243G1_scaffold_27_7
unknown

Not on your lists

5232..5321
DNA (90bp) protein (30aa)

This feature has no annotations

L3_072_243G1_scaffold_27_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5310..6908)
DNA (1599bp) protein (533aa)
Recombinase family protein n=2 Tax=Clostridium difficile RepID=T4PMT8_CLODI
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:CCL22101.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Site-specific recombinase, resolvase family
L3_072_243G1_scaffold_27_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7236..7412
DNA (177bp) protein (59aa)
Uncharacterized protein n=180 Tax=Clostridium difficile RepID=Q187L7_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22102.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_243G1_scaffold_27_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7586..8716
DNA (1131bp) protein (377aa)
eutG; ethanolamine iron-dependent alcohol dehydrogenase (EC:1.1.1.1)
Iron-containing alcohol dehydrogenase family protein n=115 Tax=Clostridium difficile RepID=T2TUI7_CLODI
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:EQE64551.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_243G1_scaffold_27_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8957..9307
DNA (351bp) protein (117aa)
Propanediol utilization protein PduU n=196 Tax=Clostridium difficile RepID=T3GR55_CLODC
eutS; Ethanolamine carboxysome structural protein
BMC domain protein {ECO:0000313|EMBL:EHJ29609.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_243G1_scaffold_27_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9315..9752
DNA (438bp) protein (146aa)
Ethanolamine utilization protein, EutP n=2 Tax=Clostridium difficile RepID=T4PLT3_CLODI
Ethanolamine utilization protein {ECO:0000313|EMBL:CCL22105.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
eutP; ethanolamine utilization protein
L3_072_243G1_scaffold_27_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9865..10440
DNA (576bp) protein (192aa)
Two-component response regulator n=132 Tax=Clostridium difficile RepID=C9YMM2_CLODR
two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFH15561.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
L3_072_243G1_scaffold_27_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10433..11842
DNA (1410bp) protein (470aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=2 Tax=Clostridium difficile RepID=T4PM60_CLODI
eutW; Two-component sensor histidinekinase,Ethanolamine specific
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EQH99548.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_072_243G1_scaffold_27_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12026..13459
DNA (1434bp) protein (478aa)
Ethanolamine utilization EutA family protein n=2 Tax=Clostridium difficile RepID=T4PFW8_CLODI
Ethanolamine reactivating factor for ammonia lyase eutBC {ECO:0000313|EMBL:CCL22108.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
eutA; reactivating factor for ethanolamine ammonia lyase
L3_072_243G1_scaffold_27_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13477..14841
DNA (1365bp) protein (455aa)
eutB; ethanolamine ammonia lyase large subunit (EC:4.3.1.7)
Ethanolamine ammonia-lyase, large subunit n=166 Tax=Clostridium difficile RepID=G6BS13_CLODI
Ethanolamine ammonia lyase large subunit family protein {ECO:0000313|EMBL:EQH99550.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_072_243G1_scaffold_27_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14854..15735
DNA (882bp) protein (294aa)
eutC; Ethanolamine ammonia lyase small subunit (EC:4.3.1.7)
Ethanolamine ammonia-lyase light chain {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064958};; Ethanolamine ammonia-lyase small subunit {ECO:0000256|HAMAP-Rule:MF_00601}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Ethanolamine ammonia-lyase light chain n=2 Tax=Clostridium difficile RepID=T4PLT7_CLODI
L3_072_243G1_scaffold_27_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15755..16408
DNA (654bp) protein (218aa)
Ethanolamine utilization protein EutL n=193 Tax=Clostridium difficile RepID=T3GM81_CLODC
eutL; ethanolamine utilization protein EutL
Ethanolamine utilization protein EutL {ECO:0000313|EMBL:EQE64538.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_243G1_scaffold_27_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16419..17120
DNA (702bp) protein (234aa)
BMC domain protein n=2 Tax=Clostridium difficile RepID=T4PM65_CLODI
Ethanolamine carboxysome strutural protein {ECO:0000313|EMBL:CCL22112.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ethanolamine/propanediol utilisation protein
L3_072_243G1_scaffold_27_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17123..18592
DNA (1470bp) protein (490aa)
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:EQH99554.1}; EC=1.2.1.10 {ECO:0000313|EMBL:EQH99554.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Acetaldehyde dehydrogenase n=90 Tax=Clostridium difficile RepID=T2TUJ5_CLODI
ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase
L3_072_243G1_scaffold_27_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18688..18975
DNA (288bp) protein (96aa)
BMC domain protein n=179 Tax=Clostridium difficile RepID=C9XJE7_CLODC
eutM; ethanolamine/propanediol utilization protein
BMC domain protein {ECO:0000313|EMBL:EQG75935.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_243G1_scaffold_27_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19102..19863
DNA (762bp) protein (254aa)
Cobalamin adenosyltransferase family protein n=12 Tax=Clostridium difficile RepID=T3P4X3_CLODI
eutT; ethanolamine/propanediol utilization cobalamin adenosyltransferase
Putative ethanolamine/propanediol utilization cobalamin adenosyltransferase {ECO:0000313|EMBL:CBE04700.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_243G1_scaffold_27_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19876..20505
DNA (630bp) protein (210aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Phosphate propanoyltransferase n=182 Tax=Clostridium difficile RepID=PDUL_CLOD6
propanediol utilization phosphotransacylase
L3_072_243G1_scaffold_27_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20547..21272
DNA (726bp) protein (242aa)
Putative ethanolamine utilization protein n=89 Tax=Clostridium difficile RepID=T2TTN7_CLODI
putative ethanolamine utilization protein
Putative ethanolamine utilization protein {ECO:0000313|EMBL:EQH99558.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_072_243G1_scaffold_27_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21285..21557
DNA (273bp) protein (91aa)
Ethanolamine utilization EutN/carboxysome family protein n=205 Tax=Clostridium difficile RepID=C9XJF1_CLODC
ethanolamine/propanediol utilization protein
Ethanolamine carboxysome structural protein {ECO:0000313|EMBL:CCL30127.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_243G1_scaffold_27_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21550..22101
DNA (552bp) protein (184aa)
BMC domain protein n=2 Tax=Clostridium difficile RepID=T4PLY6_CLODI
ethanolamine utilization protein
BMC domain protein {ECO:0000313|EMBL:EQG76420.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_243G1_scaffold_27_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22101..23204
DNA (1104bp) protein (368aa)
Ethanolamine transport protein n=2 Tax=Clostridium difficile RepID=U3Y4L8_CLODI
Ethanolamine transport protein {ECO:0000313|EMBL:CCL22120.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
eutH; ethanolamine/propanediol transporter
L3_072_243G1_scaffold_27_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23206..23679
DNA (474bp) protein (158aa)
Cupin domain protein n=202 Tax=Clostridium difficile RepID=C9XJF4_CLODC
eutQ; ethanolamine/propanediol utilization protein
Ethanolamine utilization protein {ECO:0000313|EMBL:CCK94271.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L3_072_243G1_scaffold_27_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24195..24716
DNA (522bp) protein (174aa)
Possible transcriptional regulator n=174 Tax=Clostridium difficile RepID=C9XJF5_CLODC
transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EHJ29631.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_243G1_scaffold_27_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25095..26270
DNA (1176bp) protein (392aa)
Amidohydrolase family protein n=2 Tax=Clostridium difficile RepID=T4PFY0_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EQH99564.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
peptidase
Displaying items 1-30 of 193 in total

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