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L3_072_243G1_scaffold_95

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_95_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(357..1439)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76518.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
membrane protein
L3_072_243G1_scaffold_95_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1869..3008)
DNA (1140bp) protein (380aa)
IS605 OrfB family transposase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE96_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EES76517.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transposase, IS605 OrfB family, central region
L3_072_243G1_scaffold_95_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3093..3497
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76516.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
IS200/IS605 family transposase
L3_072_243G1_scaffold_95_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3719..4789
DNA (1071bp) protein (357aa)
Cysteine desulfurase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE94_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:EES76515.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cysteine desulfurase family protein
L3_072_243G1_scaffold_95_5
unknown

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comp(4641..4964)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_072_243G1_scaffold_95_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4995..5891
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76514.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L3_072_243G1_scaffold_95_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5895..8696)
DNA (2802bp) protein (934aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE92_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EES76513.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
L3_072_243G1_scaffold_95_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8942..9673)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE90_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-2 type transporter.
L3_072_243G1_scaffold_95_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9747..10589)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE89_9FIRM
Abc transporter {ECO:0000313|EMBL:CDD79413.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type multidrug transport system, ATPase component
L3_072_243G1_scaffold_95_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10586..11281)
DNA (696bp) protein (232aa)
precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ2_9FIRM
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:CDD79412.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_95_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11527..12045
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79411.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_95_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12126..13436)
DNA (1311bp) protein (437aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN85_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDD79410.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_95_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13565..16066)
DNA (2502bp) protein (834aa)
Transglutaminase domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMH3_9FIRM
Transglutaminase domain-containing protein {ECO:0000313|EMBL:CDD79409.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_072_243G1_scaffold_95_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16066..16812)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE84_9FIRM
CutC family protein {ECO:0000313|EMBL:CDD79408.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein involved in copper resistance
L3_072_243G1_scaffold_95_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16911..17693)
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE83_9FIRM
DeoR-family transcriptional regulator {ECO:0000313|EMBL:CDD79407.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulators of sugar metabolism
L3_072_243G1_scaffold_95_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17774..18748)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79406.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
peptide ABC transporter ATPase
L3_072_243G1_scaffold_95_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18752..19741)
DNA (990bp) protein (330aa)
Glutathione import ATP-binding protein GsiA n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN80_9FIRM
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CDD79405.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter ATP-binding protein
L3_072_243G1_scaffold_95_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19754..20653)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMG8_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD79404.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter permease
L3_072_243G1_scaffold_95_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20667..21587)
DNA (921bp) protein (307aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPM0_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD79403.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
gsiC; glutathione ABC transporter permease GsiC
L3_072_243G1_scaffold_95_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21800..23410)
DNA (1611bp) protein (537aa)
Extracellular solute-binding protein family 5 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNY4_9FIRM
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CDD79402.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative glutathione-binding protein GsiB
L3_072_243G1_scaffold_95_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23802..24662)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76499.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Small-conductance mechanosensitive channel
L3_072_243G1_scaffold_95_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24969..25262)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76498.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L3_072_243G1_scaffold_95_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25291..25524)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79399.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_95_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25688..26581
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76496.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
L3_072_243G1_scaffold_95_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26669..28828)
DNA (2160bp) protein (720aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE74_9FIRM
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EES76495.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional accessory protein
L3_072_243G1_scaffold_95_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29152..30432)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76494.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted aminopeptidases
L3_072_243G1_scaffold_95_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30582..31604)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79395.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted integral membrane protein
L3_072_243G1_scaffold_95_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31619..32827)
DNA (1209bp) protein (403aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE71_9FIRM
L3_072_243G1_scaffold_95_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32991..34205)
DNA (1215bp) protein (405aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Ruminococcus RepID=C6JE70_9FIRM
L3_072_243G1_scaffold_95_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34212..34667)
DNA (456bp) protein (152aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein RSAG_02236 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE69_9FIRM
UPF0735 ACT domain-containing protein RSAG_02236 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Displaying items 1-30 of 137 in total

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