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L3_072_243G1_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_130_1
unknown

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comp(1912..2001)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_072_243G1_scaffold_130_2
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2072..2350)
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LL10_9FIRM
CRISPR-associated protein, Cas2 family
L3_072_243G1_scaffold_130_3
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2354..3346)
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LL11_9FIRM
CRISPR-associated protein, Cas1 family
L3_072_243G1_scaffold_130_4
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3375..3869)
DNA (495bp) protein (165aa)
CRISPR-associated protein Cas4 n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFZ5_9FIRM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EDR97015.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
CRISPR-associated exonuclease, Cas4 family
L3_072_243G1_scaffold_130_5
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(3885..6281)
DNA (2397bp) protein (799aa)
CRISPR-associated helicase Cas3 domain protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V7Y4_9FIRM
CRISPR-associated helicase Cas3 domain protein {ECO:0000313|EMBL:CDC93210.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
CRISPR-associated helicase Cas3
L3_072_243G1_scaffold_130_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(6352..7086)
DNA (735bp) protein (245aa)
CRISPR-associated protein Cas5 Tneap subtype n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VG67_9FIRM
CRISPR-associated protein Cas5 Tneap subtype {ECO:0000313|EMBL:CDC93209.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
CRISPR-associated protein Cas5, Tneap subtype
L3_072_243G1_scaffold_130_7
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7070..7945)
DNA (876bp) protein (292aa)
CRISPR-associated autoregulator, Cst2 family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LL15_9FIRM
CRISPR-associated autoregulator, Cst2 family
CRISPR-associated autoregulator, Cst2 family {ECO:0000313|EMBL:CBL20526.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_072_243G1_scaffold_130_8
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(7948..9639)
DNA (1692bp) protein (564aa)
CRISPR-associated CXXC_CXXC protein Cst1 n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WG86_9FIRM
CRISPR-associated CXXC_CXXC protein Cst1 {ECO:0000313|EMBL:CDC93207.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
CRISPR-associated CXXC_CXXC protein Cst1
L3_072_243G1_scaffold_130_9
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(9657..10379)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VLZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93206.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
L3_072_243G1_scaffold_130_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10710..12500)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76427.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized flavoproteins
L3_072_243G1_scaffold_130_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13063..14232)
DNA (1170bp) protein (390aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPU8_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDD79976.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amidohydrolase
L3_072_243G1_scaffold_130_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14253..16142)
DNA (1890bp) protein (630aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79977.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_130_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16168..17055)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79978.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L3_072_243G1_scaffold_130_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17142..20114)
DNA (2973bp) protein (991aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79980.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Signal transduction histidine kinase
L3_072_243G1_scaffold_130_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20120..21970)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79982.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type sugar transport system, periplasmic component
L3_072_243G1_scaffold_130_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21970..24147)
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79984.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Signal transduction histidine kinase
L3_072_243G1_scaffold_130_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24137..24952)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79986.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_072_243G1_scaffold_130_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25388..26731)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79991.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_130_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26950..27408
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79992.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, AsnC family
L3_072_243G1_scaffold_130_20
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27964..28941)
DNA (978bp) protein (326aa)
NAD-dependent protein deacetylases, SIR2 family n=1 Tax=Coprococcus catus GD/7 RepID=D4JAB9_9FIRM
NAD-dependent protein deacetylases, SIR2 family
NAD-dependent protein deacetylases, SIR2 family {ECO:0000313|EMBL:CBK81290.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_072_243G1_scaffold_130_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28990..29892)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JES6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76697.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
NAD-dependent protein deacetylases, SIR2 family
L3_072_243G1_scaffold_130_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30040..30477
DNA (438bp) protein (146aa)
Transcriptional regulator, Rrf2 family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZR49_9FIRM
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EDM88056.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
transcriptional regulator, BadM/Rrf2 family
L3_072_243G1_scaffold_130_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30567..30890
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JES4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76695.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Archaeal ATPase.
L3_072_243G1_scaffold_130_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31002..31274
DNA (273bp) protein (91aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JES3_9FIRM
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EES76694.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
toxin-antitoxin system, antitoxin component
L3_072_243G1_scaffold_130_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31271..31552
DNA (282bp) protein (94aa)
RelE/StbE family addiction module toxin n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JES2_9FIRM
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EES76693.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_130_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31588..31818
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=T5LJZ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQM98778.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_130_27
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32067..32510)
DNA (444bp) protein (148aa)
Integrase n=1 Tax=Streptococcus anginosus 1505 RepID=U2ZGJ1_STRAP
integrase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFU22051.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus F0211.;"
L3_072_243G1_scaffold_130_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32470..32610)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63293.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Bacterial mobilisation protein (MobC).
L3_072_243G1_scaffold_130_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33087..33407)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73523.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
TfoX N-terminal domain-containing protein
L3_072_243G1_scaffold_130_30
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33427..34059)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73524.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
Displaying items 1-30 of 84 in total

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