ggKbase home page

L3_072_243G1_scaffold_180

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_180_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..604
DNA (603bp) protein (201aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNL7_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDM88463.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Relaxase/Mobilisation nuclease domain.
L3_072_243G1_scaffold_180_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(628..1041)
DNA (414bp) protein (138aa)
Transcriptional regulatory protein, C-terminal domain protein n=2 Tax=Clostridiales RepID=A5ZNL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75381.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_243G1_scaffold_180_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1107..1478
DNA (372bp) protein (124aa)
Penicillinase repressor n=3 Tax=Clostridiales RepID=A5ZNL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78629.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted transcriptional regulator
L3_072_243G1_scaffold_180_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1489..3285
DNA (1797bp) protein (599aa)
Putative regulatory protein blaR1 n=1 Tax=Blautia sp. KLE 1732 RepID=U2CVZ9_9FIRM
Putative regulatory protein blaR1 {ECO:0000313|EMBL:ERI94694.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Beta-lactamase class D
L3_072_243G1_scaffold_180_5
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3313..4560)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DED9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94693.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_072_243G1_scaffold_180_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4547..5704)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EJ99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94692.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_072_243G1_scaffold_180_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5745..7847)
DNA (2103bp) protein (701aa)
Pbp n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002ED950C
Uncharacterized protein {ECO:0000313|EMBL:EES78633.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_072_243G1_scaffold_180_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8575..8820)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78635.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_180_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8817..8975)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LXP4_9FIRM
Domain of unknown function (DUF955).
Uncharacterized protein {ECO:0000313|EMBL:CBL22397.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_243G1_scaffold_180_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9067..10215
DNA (1149bp) protein (383aa)
Citrate transporter n=2 Tax=root RepID=U2R0L1_9FIRM
Citrate transporter {ECO:0000313|EMBL:ERK47113.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_072_243G1_scaffold_180_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10405..11172)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78638.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L3_072_243G1_scaffold_180_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11201..11671)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78639.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
flavodoxin
L3_072_243G1_scaffold_180_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11798..12676)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78640.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L3_072_243G1_scaffold_180_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12898..13218)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78641.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted pyrophosphatase
L3_072_243G1_scaffold_180_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13310..15127)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76892.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Alcohol acetyltransferase.
L3_072_243G1_scaffold_180_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15124..16074)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78643.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alpha/beta hydrolase
L3_072_243G1_scaffold_180_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16216..17367)
DNA (1152bp) protein (384aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
Isoaspartyl dipeptidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J2_9FIRM
L3_072_243G1_scaffold_180_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17397..18917)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78645.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L3_072_243G1_scaffold_180_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19055..20044)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78646.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Guanosine polyphosphate pyrophosphohydrolases/synthetases
L3_072_243G1_scaffold_180_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20145..20732)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78647.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_180_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20804..21595)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78648.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_180_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21570..22544)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78649.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_072_243G1_scaffold_180_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22635..23483)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78650.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
L3_072_243G1_scaffold_180_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23485..24339)
DNA (855bp) protein (285aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J9_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_180_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24512..25141)
DNA (630bp) protein (210aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8K0_9FIRM
Methenyl-THF cyclohydrolase {ECO:0000313|EMBL:CDD76877.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_180_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25234..25902)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78653.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_180_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26009..27949)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78654.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized metal-binding protein
L3_072_243G1_scaffold_180_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28083..28868)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78655.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Pterin binding enzyme.
L3_072_243G1_scaffold_180_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28970..30328)
DNA (1359bp) protein (453aa)
acetyl-CoA decarbonylase/synthase gamma subunit (EC:1.2.99.2 2.1.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78656.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_180_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30351..31295)
DNA (945bp) protein (315aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78657.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Displaying items 1-30 of 56 in total

View Taxonomy