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L3_072_243G1_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_194_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
Transposase IS3/IS911 family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX9_BIFLJ
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADH01385.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_072_243G1_scaffold_194_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

421..1986
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPT1_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52618.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_194_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2333..3328)
DNA (996bp) protein (332aa)
Conserved hypothetical secreted protein with G5 domain n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZT0_BIFBP
hypothetical protein
Conserved hypothetical secreted protein with G5 domain {ECO:0000313|EMBL:CDB22127.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_243G1_scaffold_194_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3564..3926)
DNA (363bp) protein (121aa)
thioredoxin (EC:1.8.1.8)
Thioredoxin n=4 Tax=Bifidobacterium bifidum RepID=E4NZT1_BIFBP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_243G1_scaffold_194_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4124..4750
DNA (627bp) protein (209aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WGF1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42472.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_243G1_scaffold_194_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4896..5750
DNA (855bp) protein (285aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CCD9_BIFBI
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERI82185.1}; Putative alpha/beta hydrolase {ECO:0000313|EMBL:BAQ97591.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hydrolase, alpha/beta fold family
L3_072_243G1_scaffold_194_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5864..6955
DNA (1092bp) protein (364aa)
Phosphohydrolase (MutT/nudix family protein) n=2 Tax=Bifidobacterium RepID=E3EPT6_BIFBS
phosphohydrolase
Phosphohydrolase (MutT/nudix family protein) {ECO:0000313|EMBL:ADO52623.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_194_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7033..8883
DNA (1851bp) protein (617aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CDW7_BIFBI
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ERI82188.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97593.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_243G1_scaffold_194_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9031..9438
DNA (408bp) protein (136aa)
Glycine cleavage system H protein n=6 Tax=Bifidobacterium bifidum RepID=E3EPT8_BIFBS
gcvH; glycine cleavage system H protein GcvH
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_243G1_scaffold_194_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9566..10915
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HWF3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50772.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_072_243G1_scaffold_194_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10971..13433
DNA (2463bp) protein (821aa)
ptrB; protease II PtrB (EC:3.4.21.83)
PtrB Protease II n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZT8_BIFBP
PtrB Protease II {ECO:0000313|EMBL:CDB22817.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_243G1_scaffold_194_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14007..15038
DNA (1032bp) protein (344aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:AFL03971.1}; EC=1.1.1.85 {ECO:0000313|EMBL:AFL03971.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
3-isopropylmalate dehydrogenase n=2 Tax=Bifidobacterium bifidum RepID=I3WGF8_BIFBI
L3_072_243G1_scaffold_194_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15797..16435
DNA (639bp) protein (213aa)
Lipoate-protein ligase A n=2 Tax=Bifidobacterium RepID=E3EPU3_BIFBS
lplA; Lipoate-protein ligase A
Lipoate-protein ligase A {ECO:0000313|EMBL:CDB22397.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_243G1_scaffold_194_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16599..17318
DNA (720bp) protein (240aa)
transcription regulator, crp family (EC:3.1.1.5)
Transcription regulator, crp family n=6 Tax=Bifidobacterium RepID=E4NZU1_BIFBP
Transcription regulator crp family {ECO:0000313|EMBL:CDB22396.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_243G1_scaffold_194_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17493..19802
DNA (2310bp) protein (770aa)
pbp; penicillin-binding protein Pbp (EC:2.4.1.129)
Transglycosylase n=2 Tax=Bifidobacterium bifidum RepID=E4V820_BIFBI
Transglycosylase {ECO:0000313|EMBL:EFR49762.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_243G1_scaffold_194_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20089..21222
DNA (1134bp) protein (378aa)
yqjM; putative NADH-dependent flavin oxidoreductase (EC:1.6.99.1)
Putative NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:AFL03975.1}; EC=1.6.99.1 {ECO:0000313|EMBL:AFL03975.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
NADH-dependent flavin oxidoreductase YqjM n=3 Tax=Bifidobacterium RepID=E3ELT7_BIFBS
L3_072_243G1_scaffold_194_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21292..22449)
DNA (1158bp) protein (386aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Dihydroorotate dehydrogenase n=8 Tax=Bifidobacterium RepID=E3ELT8_BIFBS
pyrD2; dihydroorotate dehydrogenase
L3_072_243G1_scaffold_194_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22643..23446
DNA (804bp) protein (268aa)
Transcriptional regulator, DeoR family n=7 Tax=Bifidobacterium RepID=E3ELT9_BIFBS
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFR49766.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_243G1_scaffold_194_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23729..24559
DNA (831bp) protein (277aa)
galT; galactose-1-phosphate uridylyl transferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=6 Tax=Bifidobacterium RepID=E3ELU0_BIFBS
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ADO52636.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_194_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24649..25899
DNA (1251bp) protein (417aa)
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase n=8 Tax=Bifidobacterium RepID=E3ELU1_BIFBS
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_243G1_scaffold_194_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26117..27442)
DNA (1326bp) protein (442aa)
Transporter, major facilitator superfamily MFS1, alpha-ketoglutarate permease n=5 Tax=Bifidobacterium RepID=E3ELU2_BIFBS
kgtP; transporter major facilitator superfamily MFS1, alpha-ketoglutarate permease
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI82055.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_243G1_scaffold_194_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27819..28091
DNA (273bp) protein (91aa)
UPF0237 protein BBIF_0434 n=8 Tax=Bifidobacterium RepID=E3ELU3_BIFBS
hypothetical protein
UPF0237 protein BBIF_0434 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_194_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28111..29475
DNA (1365bp) protein (455aa)
UPF0210 protein BBIF_0435 n=5 Tax=Bifidobacterium bifidum RepID=E3ELU4_BIFBS
hypothetical protein
UPF0210 protein BBB_0387 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_243G1_scaffold_194_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30122..30586
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BV40_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42491.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L3_072_243G1_scaffold_194_25
unknown

Not on your lists

comp(30757..31383)
DNA (627bp) protein (209aa)

This feature has no annotations

L3_072_243G1_scaffold_194_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31736..32383)
DNA (648bp) protein (216aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELU6_BIFBS
RNA methyltransferase
L3_072_243G1_scaffold_194_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32468..32656
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELU7_BIFBS
coagulation factor 5/8 type domain
Uncharacterized protein {ECO:0000313|EMBL:ADO52643.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_194_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32888..33352
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELU7_BIFBS
coagulation factor 5/8 type domain
Uncharacterized protein {ECO:0000313|EMBL:ADO52643.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_243G1_scaffold_194_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33397..34908
DNA (1512bp) protein (504aa)
MutY A/G-specific adenine DNA glycosylase {ECO:0000313|EMBL:KFI42495.1}; EC=4.2.99.18 {ECO:0000313|EMBL:KFI42495.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
A/G-specific adenine DNA glycosylase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GM91_9BIFI
mutY; A/G-specific adenine glycosylase
L3_072_243G1_scaffold_194_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35087..35659
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V837_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR49779.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Displaying items 1-30 of 76 in total

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