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L3_072_243G1_scaffold_230

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_230_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..773
DNA (771bp) protein (257aa)
Vitamin B12 import system permease protein BtuC n=1 Tax=Escherichia coli KTE240 RepID=S1QL33_ECOLX
btuC; vtamin B12-transporter permease
Vitamin B12 import system permease protein BtuC {ECO:0000256|HAMAP-Rule:MF_01004, ECO:0000256|SAAS:SAAS00165801}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L3_072_243G1_scaffold_230_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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835..1386
DNA (552bp) protein (184aa)
Glutathione peroxidase n=132 Tax=Escherichia coli RepID=A1ABP6_ECOK1
btuE; glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_243G1_scaffold_230_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1386..2135
DNA (750bp) protein (250aa)
btuC; vitamin B12-transporter ATPase (EC:3.6.3.33)
Vitamin B12 import ATP-binding protein BtuD {ECO:0000256|HAMAP-Rule:MF_01005}; EC=3.6.3.33 {ECO:0000256|HAMAP-Rule:MF_01005};; Vitamin B12-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01005}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
Vitamin B12 import ATP-binding protein BtuD n=303 Tax=Escherichia RepID=BTUD_ECO27
L3_072_243G1_scaffold_230_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2213..2677
DNA (465bp) protein (155aa)
nlpC; lipoprotein NlpC (EC:3.4.22.-)
Putative lipoprotein {ECO:0000313|EMBL:CKI18630.1}; EC=3.4.-.- {ECO:0000313|EMBL:CKI18630.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Predicted lipoprotein n=127 Tax=Escherichia RepID=B7US47_ECO27
L3_072_243G1_scaffold_230_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2924..3637
DNA (714bp) protein (238aa)
Uncharacterized protein n=171 Tax=Escherichia RepID=B7MAR8_ECO45
ydiV; hypothetical protein
Cyclic di-GMP regulator CdgR {ECO:0000313|EMBL:EHU28051.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L3_072_243G1_scaffold_230_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3700..5136
DNA (1437bp) protein (479aa)
UPF0061 protein YdiU n=24 Tax=Escherichia coli RepID=B3HR59_ECOLX
hypothetical protein
UPF0061 protein YdiU {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_072_243G1_scaffold_230_7
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5140..5331)
DNA (192bp) protein (64aa)
Conserved protein, hemin uptake protein HemP-like protein n=31 Tax=Enterobacteriaceae RepID=G4Q0Q4_ECOLX
ydiE; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ30181.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L3_072_243G1_scaffold_230_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5463..6509)
DNA (1047bp) protein (349aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive n=625 Tax=Enterobacteriaceae RepID=AROH_ECOL6
L3_072_243G1_scaffold_230_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6666..7499)
DNA (834bp) protein (278aa)
Phosphoenolpyruvate synthase regulatory protein {ECO:0000255|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000255|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000255|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000255|HAMAP-Rule:MF_01062};; EC=2.7.4.28 {ECO:0000255|HAMAP-Rule:MF_01062};; Pyruvate, water dikinase regulatory protein {ECO:0000255|HAMAP-Rule:MF_01062}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Phosphoenolpyruvate synthase regulatory protein n=25 Tax=Escherichia coli RepID=PSRP_ECOL5
hypothetical protein
L3_072_243G1_scaffold_230_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7832..10210
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Phosphoenolpyruvate synthase n=139 Tax=Escherichia coli RepID=E1PBZ6_ECOAB
ppsA; phosphoenolpyruvate synthase
L3_072_243G1_scaffold_230_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10267..11913)
DNA (1647bp) protein (549aa)
Short-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EZJ41406.1}; EC=6.2.1.- {ECO:0000313|EMBL:EZJ41406.1};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Short chain acyl-CoA synthetase n=27 Tax=Escherichia coli RepID=E9U1E6_ECOLX
short chain acyl-CoA synthetase
L3_072_243G1_scaffold_230_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11970..12263)
DNA (294bp) protein (98aa)
Iron-sulfur cluster-binding protein n=19 Tax=Escherichia coli RepID=B3HR66_ECOLX
ydiT; ferredoxin-like protein ydiT
Ferredoxin-like protein ydiT {ECO:0000313|EMBL:EQP55105.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_072_243G1_scaffold_230_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12260..13549)
DNA (1290bp) protein (430aa)
Putative anaerobic carnitine metabolism flavoprotein {ECO:0000313|EMBL:EHU58847.1}; EC=1.5.5.- {ECO:0000313|EMBL:EHU58847.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Protein FixC homolog n=25 Tax=Escherichia coli RepID=B3HR67_ECOLX
hypothetical protein
L3_072_243G1_scaffold_230_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13604..14542)
DNA (939bp) protein (313aa)
Protein FixB homolog n=38 Tax=Escherichia coli RepID=B3HR68_ECOLX
electron transfer flavoprotein subunit YdiR
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:ESD44439.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_072_243G1_scaffold_230_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14562..15326)
DNA (765bp) protein (255aa)
Electron transfer flavoprotein FixB n=123 Tax=Escherichia RepID=V8KVD6_ECOLX
putative flavoprotein FixA
Putative flavoprotein subunit required for anaerobic carnitine metabolism {ECO:0000313|EMBL:EHU46167.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_072_243G1_scaffold_230_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..15539
DNA (177bp) protein (59aa)
Uncharacterized protein n=966 Tax=Enterobacteriaceae RepID=A7ZMG2_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZK23065.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L3_072_243G1_scaffold_230_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15642..16553
DNA (912bp) protein (304aa)
Uncharacterized HTH-type transcriptional regulator n=403 Tax=Enterobacteriaceae RepID=E2QMQ7_ECOLX
transcriptional regulator YdiP
Cupin domain protein {ECO:0000313|EMBL:EHU14991.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_072_243G1_scaffold_230_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16596..17747)
DNA (1152bp) protein (384aa)
Probable acyl-CoA dehydrogenase YdiO n=1151 Tax=Enterobacteriaceae RepID=YDIO_ECO57
acyl-CoA dehydrogenase domain-containing protein
Putative oxidoreductase {ECO:0000313|EMBL:CCK46930.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L3_072_243G1_scaffold_230_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17761..19356)
DNA (1596bp) protein (532aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Acetate CoA-transferase YdiF n=26 Tax=Escherichia coli RepID=Q0THD5_ECOL5
hypothetical protein
L3_072_243G1_scaffold_230_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19501..20259)
DNA (759bp) protein (253aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
3-dehydroquinate dehydratase n=35 Tax=Escherichia coli RepID=AROD_ECOL5
L3_072_243G1_scaffold_230_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20290..21156)
DNA (867bp) protein (289aa)
Quinate/shikimate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; EC=1.1.1.282 {ECO:0000256|HAMAP-Rule:MF_01578};; NAD-dependent shikimate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Quinate/shikimate dehydrogenase n=185 Tax=Escherichia RepID=YDIB_ECO27
ydiB; quinate/shikimate dehydrogenase
L3_072_243G1_scaffold_230_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21168..22433)
DNA (1266bp) protein (422aa)
Inner membrane transport protein ydiN n=382 Tax=Escherichia RepID=E2QMQ2_ECOLX
transporter
Inner membrane transport protein ydiN {ECO:0000313|EMBL:EZJ41395.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_072_243G1_scaffold_230_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22660..23874)
DNA (1215bp) protein (405aa)
Major facilitator family transporter n=25 Tax=Escherichia coli RepID=B3HR77_ECOLX
transporter
Inner membrane transport protein YdiM {ECO:0000313|EMBL:EGI16100.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_072_243G1_scaffold_230_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23974..24330)
DNA (357bp) protein (119aa)
Uncharacterized protein n=320 Tax=Enterobacteriaceae RepID=G7R7E0_ECOC2
ydiL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELJ72663.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_072_243G1_scaffold_230_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24759..25871)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=273 Tax=Escherichia coli RepID=B7MVG4_ECO81
ydiK; putative inner membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDL42271.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_072_243G1_scaffold_230_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26085..29141
DNA (3057bp) protein (1019aa)
Oxidoreductase, FAD-binding n=24 Tax=Escherichia coli RepID=B3HR80_ECOLX
oxidase
Membrane protein {ECO:0000313|EMBL:AJO83620.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_072_243G1_scaffold_230_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29138..29548
DNA (411bp) protein (137aa)
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936}; Short=DHNA-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936};; EC=3.1.2.28 {ECO:0000256|HAMAP-Rule:MF_01936};; DHNA-CoA thioesterase {ECO:0000256|HAMAP-Rule:MF_01936}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
Esterase ydiI n=596 Tax=Enterobacteriaceae RepID=E2QMP7_ECOLX
hypothetical protein
L3_072_243G1_scaffold_230_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29648..29836
DNA (189bp) protein (63aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D7XNJ2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:END91983.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_072_243G1_scaffold_230_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30385..30753
DNA (369bp) protein (123aa)
Protein sufA n=75 Tax=Escherichia coli RepID=E2QMP5_ECOLX
sufA; iron-sulfur cluster assembly scaffold protein
Protein sufA {ECO:0000313|EMBL:EOW98471.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_072_243G1_scaffold_230_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30762..32249
DNA (1488bp) protein (496aa)
Component of SufBCD complex n=68 Tax=Escherichia coli RepID=B7MVF9_ECO81
sufB; cysteine desulfurase activator complex subunit SufB
Component of SufBCD complex {ECO:0000313|EMBL:CAR08075.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
Displaying items 1-30 of 47 in total

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