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L3_072_243G1_scaffold_243

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_243_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

137..514
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78177.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_243_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

537..1205
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78756.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterised protein family (UPF0153).
L3_072_243G1_scaffold_243_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1365..2567)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80174.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_243_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2572..3573)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78747.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_243_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3805..5961
DNA (2157bp) protein (719aa)
D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U4_9FIRM
D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase {ECO:0000313|EMBL:EES78746.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved hypothetical protein TIGR02336
L3_072_243G1_scaffold_243_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6160..7221)
DNA (1062bp) protein (354aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80178.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_243_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7493..8983
DNA (1491bp) protein (497aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80179.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_243_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9431..10558
DNA (1128bp) protein (376aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U1_9FIRM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_243_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10539..11186
DNA (648bp) protein (216aa)
riboflavin synthase, alpha subunit (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U0_9FIRM
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EES78742.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_243_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11351..12550
DNA (1200bp) protein (400aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=2 Tax=Ruminococcus RepID=C6J8T9_9FIRM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_243_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12647..13132
DNA (486bp) protein (162aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Ruminococcus RepID=C6J8T8_9FIRM
L3_072_243G1_scaffold_243_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13129..14178)
DNA (1050bp) protein (350aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
RluA family pseudouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T7_9FIRM
L3_072_243G1_scaffold_243_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14331..15266
DNA (936bp) protein (312aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=2 Tax=Ruminococcus RepID=C6J8T6_9FIRM
L3_072_243G1_scaffold_243_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15404..17008)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T5_9FIRM
L3_072_243G1_scaffold_243_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17468..18232
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79043.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_243_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18491..18832
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78735.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
arsenate reductase-like protein
L3_072_243G1_scaffold_243_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19011..20027
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8T2_9FIRM
AAA ATPase {ECO:0000313|EMBL:CDD79041.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase AAA
L3_072_243G1_scaffold_243_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20024..20545
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78733.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_243G1_scaffold_243_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20590..21090
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F72D57
Uncharacterized protein {ECO:0000313|EMBL:EES78732.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Protein of unknown function (DUF1653).
L3_072_243G1_scaffold_243_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21254..21775
DNA (522bp) protein (174aa)
amidase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FA993B
Uncharacterized protein {ECO:0000313|EMBL:CDD79038.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Amidases related to nicotinamidase
L3_072_243G1_scaffold_243_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21863..22465
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78730.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative domain HDIG-containing protein
L3_072_243G1_scaffold_243_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22818..23414
DNA (597bp) protein (199aa)
Type III restriction protein res subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLZ2_9FIRM
Type III restriction protein res subunit {ECO:0000313|EMBL:CDD79036.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Methyltransferase domain.
L3_072_243G1_scaffold_243_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23604..24884
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98831.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transposase DDE domain.
L3_072_243G1_scaffold_243_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25115..25594
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79032.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_243_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25627..25962
DNA (336bp) protein (112aa)
HIRAN domain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM48_9FIRM
HIRAN domain {ECO:0000313|EMBL:CDD79030.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HIRAN domain.
L3_072_243G1_scaffold_243_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26207..26443
DNA (237bp) protein (79aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNL3_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CDD79028.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted transcriptional regulator
L3_072_243G1_scaffold_243_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26440..28191
DNA (1752bp) protein (584aa)
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes (EC:1.8.4.8)
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLY0_9FIRM
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes {ECO:0000313|EMBL:CDD79026.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_243G1_scaffold_243_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28193..29053
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79024.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_243_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29068..32652
DNA (3585bp) protein (1195aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79022.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_243G1_scaffold_243_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32656..33789
DNA (1134bp) protein (378aa)
Selenocysteine lyase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLA4_9FIRM
Selenocysteine lyase {ECO:0000313|EMBL:CDD79019.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Selenocysteine lyase
Displaying items 1-30 of 35 in total

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