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L3_072_243G1_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_243G1_scaffold_257_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCG6_9FIRM
Stress protein {ECO:0000313|EMBL:CDD76086.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
stress protein
L3_072_243G1_scaffold_257_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(300..881)
DNA (582bp) protein (194aa)
Tellurium resistance protein terD n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDQ5_9FIRM
Tellurium resistance protein terD {ECO:0000313|EMBL:CDD76085.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
L3_072_243G1_scaffold_257_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1425..2243
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPY0_9FIRM
conserved hypothetical protein TIGR02452
Uncharacterized protein {ECO:0000313|EMBL:CBK95149.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_072_243G1_scaffold_257_4
unknown

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2247..2414
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_243G1_scaffold_257_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2488..3522)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77261.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_243G1_scaffold_257_6
unknown

Not on your lists

comp(3711..3962)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_072_243G1_scaffold_257_7
unknown

Not on your lists

comp(4165..4527)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_072_243G1_scaffold_257_8
unknown

Not on your lists

comp(4599..4979)
DNA (381bp) protein (127aa)

This feature has no annotations

L3_072_243G1_scaffold_257_9

Not on your lists

5225..5398
DNA (174bp) protein (58aa)
Helix-turn-helix protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U007_9ZZZZ
Helix-turn-helix protein {ECO:0000313|EMBL:EKC71710.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_072_243G1_scaffold_257_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5401..6495
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA02_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08495.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_072_243G1_scaffold_257_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6537..7055
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RTH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75554.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_072_243G1_scaffold_257_12
Fusobacterium gonidiaformans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

7192..7734
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Fusobacterium gonidiaformans 3-1-5R RepID=E5BET8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS20619.1}; TaxID=469605 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium gonidiaformans 3-1-5R.;"
L3_072_243G1_scaffold_257_13
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7719..8018)
DNA (300bp) protein (100aa)
Lipoprotein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UGB2_RUMA7
lipoprotein
Lipoprotein {ECO:0000313|EMBL:ADU21950.1}; Flags: Precursor;; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_072_243G1_scaffold_257_14
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8050..9597)
DNA (1548bp) protein (516aa)
HNH endonuclease n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWE2_MAHA5
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEE97551.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_072_243G1_scaffold_257_15
unknown

Not on your lists

comp(9878..10006)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_072_243G1_scaffold_257_16
unknown

Not on your lists

10192..10698
DNA (507bp) protein (169aa)

This feature has no annotations

L3_072_243G1_scaffold_257_17
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10718..10990
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PFK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC08517.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_072_243G1_scaffold_257_18

Not on your lists

comp(11036..12940)
DNA (1905bp) protein (635aa)
helicase domain-containing protein (EC:3.6.1.-)
helicase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B79CD4
ATP-dependent RNA helicase SUV3 {ECO:0000313|EMBL:AHF24009.1}; TaxID=1393499 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1756.;"
L3_072_243G1_scaffold_257_19
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12931..13473)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SRE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP27246.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L3_072_243G1_scaffold_257_20
unknown

Not on your lists

comp(13454..13924)
DNA (471bp) protein (157aa)

This feature has no annotations

L3_072_243G1_scaffold_257_21
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14038..16311)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=8 Tax=Enterococcus faecium RepID=J6PS63_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EJX56255.1}; TaxID=1134836 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R496.;"
L3_072_243G1_scaffold_257_22
unknown

Not on your lists

comp(16331..16642)
DNA (312bp) protein (104aa)

This feature has no annotations

L3_072_243G1_scaffold_257_23
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16770..17561)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GVG0_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL84747.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L3_072_243G1_scaffold_257_24
unknown

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comp(17555..17839)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_072_243G1_scaffold_257_25
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17844..19286)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J998_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK80919.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_072_243G1_scaffold_257_26
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19392..19919
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RN38_ACIFV
Uncharacterized protein {ECO:0000313|EMBL:ETP72793.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L3_072_243G1_scaffold_257_27
unknown

Not on your lists

19970..20653
DNA (684bp) protein (228aa)

This feature has no annotations

L3_072_243G1_scaffold_257_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20748..22460)
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33674.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L3_072_243G1_scaffold_257_29
unknown

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comp(22601..23410)
DNA (810bp) protein (270aa)

This feature has no annotations

L3_072_243G1_scaffold_257_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23450..23785)
DNA (336bp) protein (112aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJP3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDK25546.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Displaying items 1-30 of 52 in total

View Taxonomy